RNA–Protein interactions for RNA: ENST00000473278.1

CCDC142-206, Transcript of coiled-coil domain containing 142, humanhuman

TSL 2

Gene CCDC142, Length 810 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-206ENST00000473278 CUTAO60888 179 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 PRPF40AO75400 957 aaKnown RBP13.32□□□□□ -0.28
CCDC142-206ENST00000473278 PRPF6O94906 941 aaKnown RBP13.32□□□□□ -0.28
CCDC142-206ENST00000473278 YEATS4O95619 227 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 SDHBP21912 280 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 AVPR1AP37288 418 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 AMPD2Q01433 879 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 DUOXA2Q1HG44 320 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 CXorf38Q8TB03 319 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 MRPS31Q92665 395 aaKnown RBP13.32□□□□□ -0.28
CCDC142-206ENST00000473278 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC142-206ENST00000473278 ANKRD36BP1Q96IX9 119 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 CEP295NLQ96MC4 621 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 TRIM9Q9C026 710 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 KIF9Q9HAQ2 790 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 MAGEF1Q9HAY2 307 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 INTS13Q9NVM9 706 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 DDX43Q9NXZ2 648 aaKnown RBP13.32□□□□□ -0.28
CCDC142-206ENST00000473278 NCDNQ9UBB6 729 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 L1RE1Q9UN81 338 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 MIA3Q5JRA6 1907 aa13.32□□□□□ -0.28
CCDC142-206ENST00000473278 GOLGA8IPA6NC78 632 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 GOLGA8JA6NMD2 632 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
CCDC142-206ENST00000473278 GABRDO14764 452 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 PAPSS2O95340 614 aaPredicted RBP13.31□□□□□ -0.28
CCDC142-206ENST00000473278 TNNC2P02585 160 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 F11P03951 625 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 KRT19P08727 400 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 TDGF1P13385 188 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
CCDC142-206ENST00000473278 CTHP32929 405 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 CNR2P34972 360 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 NLRP12P59046 1061 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 NUCB2P80303 420 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 BFSP1Q12934 665 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 MAPRE1Q15691 268 aaKnown RBP13.31□□□□□ -0.28
CCDC142-206ENST00000473278 E2F4Q16254 413 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 ITPRIPL2Q3MIP1 535 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 INTS6LQ5JSJ4 861 aaKnown RBP13.31□□□□□ -0.28
CCDC142-206ENST00000473278 ATL3Q6DD88 541 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 CLEC17AQ6ZS10 378 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 MON1AQ86VX9 555 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 KIAA2013Q8IYS2 634 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 ZNF507Q8TCN5 953 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 TRMT2BQ96GJ1 504 aaKnown RBP13.31□□□□□ -0.28
CCDC142-206ENST00000473278 MYRFLQ96LU7 910 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 LRRC3BQ96PB8 259 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 PCIF1Q9H4Z3 704 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 SNX9Q9Y5X1 595 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 NCANO14594 1321 aa13.31□□□□□ -0.28
CCDC142-206ENST00000473278 SCN1AP35498 2009 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 HOXA6P31267 233 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 WNT7BP56706 349 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 CYP4F8P98187 520 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 ZNF268Q14587 947 aaPredicted RBP13.3□□□□□ -0.28
CCDC142-206ENST00000473278 PUM1Q14671 1186 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCDC142-206ENST00000473278 TSSK4Q6SA08 328 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 LIMS2Q7Z4I7 341 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 TMEM150AQ86TG1 271 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 WDR49Q8IV35 697 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 ZSWIM2Q8NEG5 633 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 NOC3LQ8WTT2 800 aaKnown RBP13.3□□□□□ -0.28
CCDC142-206ENST00000473278 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 PKMYT1Q99640 499 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 C7orf25Q9BPX7 421 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 FAM83CQ9BQN1 747 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 TDP1Q9NUW8 608 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 TMLHEQ9NVH6 421 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 GTSE1Q9NYZ3 720 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 CGNQ9P2M7 1197 aaKnown RBP13.3□□□□□ -0.28
CCDC142-206ENST00000473278 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
CCDC142-206ENST00000473278 SIX4Q9UIU6 781 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 RAB23Q9ULC3 237 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 SMG5Q9UPR3 1016 aaKnown RBP13.3□□□□□ -0.28
CCDC142-206ENST00000473278 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
CCDC142-206ENST00000473278 PRR5-ARHGAP8B1AHC4 643 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 NOL4O94818 638 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 MAGEA11P43364 429 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 ASIC1P78348 528 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 ARHGAP8P85298 464 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 SOWAHAQ2M3V2 549 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 FAM26FQ5R3K3 315 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 CC2D1AQ6P1N0 951 aaPredicted RBP13.29□□□□□ -0.28
CCDC142-206ENST00000473278 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 VSTM1Q6UX27 236 aa13.29□□□□□ -0.28
CCDC142-206ENST00000473278 EPM2AIP1Q7L775 607 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms