RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TCEAL9Q9UHQ7 104 aa4.7□□□□□ -1.66
VPS50-209ENST00000467326 MED16Q9Y2X0 877 aa4.7□□□□□ -1.66
VPS50-209ENST00000467326 PLEKHM1Q9Y4G2 1056 aa4.7□□□□□ -1.66
VPS50-209ENST00000467326 A0A088AWK7 358 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 ADM5C9JUS6 153 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 FAM227AF5H4B4 570 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 PRPF3O43395 683 aaKnown RBP4.69□□□□□ -1.66
VPS50-209ENST00000467326 ATXN1LP0C7T5 689 aaKnown RBP4.69□□□□□ -1.66
VPS50-209ENST00000467326 RARRES1P49788 294 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 LOXL3P58215 753 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 HNRNPA0Q13151 305 aaKnown RBP4.69□□□□□ -1.66
VPS50-209ENST00000467326 BOP1Q14137 746 aaKnown RBP4.69□□□□□ -1.66
VPS50-209ENST00000467326 PTPRRQ15256 657 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 LONRF3Q496Y0 759 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 LAYNQ6UX15 382 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 OVCH2Q7RTZ1 564 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 RD3Q7Z3Z2 195 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 MAGEB6Q8N7X4 407 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 FKBP10Q96AY3 582 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 PBKQ96KB5 322 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 SPATA5L1Q9BVQ7 753 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 B3GNT5Q9BYG0 378 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 UBA5Q9GZZ9 404 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 R3HDMLQ9H3Y0 253 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 SLC52A1Q9NWF4 448 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 PIH1D1Q9NWS0 290 aaKnown RBP4.69□□□□□ -1.66
VPS50-209ENST00000467326 G3BP2Q9UN86 482 aaKnown RBP4.69□□□□□ -1.66
VPS50-209ENST00000467326 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS50-209ENST00000467326 SPATA31A6Q5VVP1 1343 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 ADGRA2Q96PE1 1338 aa4.69□□□□□ -1.66
VPS50-209ENST00000467326 A0A1W2PPL8 197 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 ERC2O15083 957 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 TSPAN6O43657 245 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 CTNND1O60716 968 aaKnown RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 PEX14O75381 377 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 TUSC2O75896 110 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 URI1O94763 535 aaPredicted RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 PARNO95453 639 aaKnown RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 NPR1P16066 1061 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 GRIA3P42263 894 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 PTH2RP49190 550 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 HNRNPMP52272 730 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS50-209ENST00000467326 AGFG1P52594 562 aaKnown RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 ZNF134P52741 427 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 CACNA2D1P54289 1103 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 RALBP1Q15311 655 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 MINDY4Q4G0A6 757 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 ANO6Q4KMQ2 910 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 TEDDM1Q5T9Z0 273 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 VPS53Q5VIR6 699 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 TMEM108Q6UXF1 575 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 GRASPQ7Z6J2 395 aaPredicted RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 TCEAL8Q8IYN2 117 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 FAM109AQ8N4B1 249 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 BOLLQ8N9W6 283 aaKnown RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 FAM136AQ96C01 138 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 NT5C1BQ96P26 610 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 BBC3Q96PG8 261 aaPredicted RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 P2RX7Q99572 595 aaKnown RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 ALG8Q9BVK2 526 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 ZMAT3Q9HA38 289 aaKnown RBP4.68□□□□□ -1.66
VPS50-209ENST00000467326 KLC4Q9NSK0 619 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 SLC17A6Q9P2U8 582 aa4.68□□□□□ -1.66
VPS50-209ENST00000467326 CCDC194A0A1B0GVG4 234 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 WDR27A2RRH5 827 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 LINC00473A8K010 186 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 VWC2LB2RUY7 222 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 DCLK1O15075 740 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 MAP4K4O95819 1239 aaPredicted RBP4.67□□□□□ -1.66
VPS50-209ENST00000467326 PPIFP30405 207 aaKnown RBP4.67□□□□□ -1.66
VPS50-209ENST00000467326 VIPR2P41587 438 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 PXNP49023 591 aaPredicted RBP4.67□□□□□ -1.66
VPS50-209ENST00000467326 LILRA4P59901 499 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 GPSM2P81274 684 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 EIF2B5Q13144 721 aaKnown RBP4.67□□□□□ -1.66
VPS50-209ENST00000467326 IQCB1Q15051 598 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 NPNTQ6UXI9 565 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 ARHGEF25Q86VW2 580 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 KBTBD7Q8WVZ9 684 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 VOPP1Q96AW1 172 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 UROC1Q96N76 676 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 MOGAT1Q96PD6 335 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 TRIM54Q9BYV2 358 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 TMEM60Q9H2L4 133 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 C1orf112Q9NSG2 853 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 CHPF2Q9P2E5 772 aa4.67□□□□□ -1.66
VPS50-209ENST00000467326 CAPN8A6NHC0 703 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 MYO1CO00159 1063 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 PHGDHO43175 533 aaKnown RBP4.66□□□□□ -1.66
VPS50-209ENST00000467326 NXPH3O95157 252 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 CENPBP07199 599 aaPredicted RBP4.66□□□□□ -1.66
VPS50-209ENST00000467326 PTMSP20962 102 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 SLC11A2P49281 568 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 ELLP55199 621 aaPredicted RBP4.66□□□□□ -1.66
VPS50-209ENST00000467326 UCP3P55916 312 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 SATB1Q01826 763 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 MLC1Q15049 377 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 AMOTQ4VCS5 1084 aa4.66□□□□□ -1.66
VPS50-209ENST00000467326 ZNF362Q5T0B9 420 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms