RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 PARD3BQ8TEW8 1205 aa17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 DDX23Q9BUQ8 820 aaKnown RBP17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 TRMT61BQ9BVS5 477 aaKnown RBP17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 IRF2BPLQ9H1B7 796 aa17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 SIT1Q9Y3P8 196 aa17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 TCHHQ07283 1943 aa17.03■□□□□ 0.32
CRAMP1-204ENST00000466562 NCANO14594 1321 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 MYBPHLA2RUH7 354 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 ATP2C2O75185 946 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 STAU1O95793 577 aaKnown RBP17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 NR3C1P04150 777 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 HMGA1P17096 107 aaKnown RBP17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 PSMC3P17980 439 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 WARSP23381 471 aaKnown RBP17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 CYP2F1P24903 491 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 CLDN10P78369 228 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 TRPC3Q13507 836 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 KCNB1Q14721 858 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 TAF12Q16514 161 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 GPR158Q5T848 1215 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 ALYREFQ86V81 257 aaKnown RBP17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 ARID3BQ8IVW6 561 aaPredicted RBP17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 DTWD2Q8NBA8 298 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 DEPDC1BQ8WUY9 529 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 FOXQ1Q9C009 403 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 BRD9Q9H8M2 597 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 ABCB6Q9NP58 842 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 DLGAP2Q9P1A6 1054 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 TRAF3IP3Q9Y228 551 aa17.02■□□□□ 0.32
CRAMP1-204ENST00000466562 KANSL1LA0AUZ9 987 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 HEPACAM2A8MVW5 462 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 CALUO43852 315 aaPredicted RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 KIF20AO95235 890 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 C4BPAP04003 597 aaKnown RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 DCNP07585 359 aaKnown RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 PDGFRBP09619 1106 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 FAM163BP0C2L3 166 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 CDC25CP30307 473 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 GDI1P31150 447 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 ATICP31939 592 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 AP3M2P53677 418 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 MYL6P60660 151 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 CYP4F8P98187 520 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 DDR2Q16832 855 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 WDR72Q3MJ13 1102 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 CFAP221Q4G0U5 840 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 ARHGAP15Q53QZ3 475 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 SDHAF4Q5VUM1 108 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 SPATA2LQ8IUW3 424 aaPredicted RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 MFSD6LQ8IWD5 586 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 STKLD1Q8NE28 680 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 PJA1Q8NG27 643 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 DNASE1L2Q92874 299 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 E2F7Q96AV8 911 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 RSPRY1Q96DX4 576 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 SYT15Q9BQS2 421 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 MRPL45Q9BRJ2 306 aaKnown RBP17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 XYLT2Q9H1B5 865 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 HEBP1Q9NRV9 189 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 FAM86C1Q9NVL1 165 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 MAPK8IP1Q9UQF2 711 aa17.01■□□□□ 0.31
CRAMP1-204ENST00000466562 PHACTR2O75167 634 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 TACC1O75410 805 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 F11P03951 625 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 CSH1P0DML2 217 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 CSH2P0DML3 217 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 CD72P21854 359 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 MRE11P49959 708 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 PSMC1P62191 440 aaKnown RBP17■□□□□ 0.31
CRAMP1-204ENST00000466562 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
CRAMP1-204ENST00000466562 TNNC1P63316 161 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 DLG4P78352 724 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 CEP135Q66GS9 1140 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 TMEM150AQ86TG1 271 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 GPIHBP1Q8IV16 184 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 IRF7Q92985 503 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
CRAMP1-204ENST00000466562 CCDC34Q96HJ3 373 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 GCNAQ96QF7 691 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 TASP1Q9H6P5 420 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 CRTAC1Q9NQ79 661 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 TRPV5Q9NQA5 729 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 MTF2Q9Y483 593 aaPredicted RBP17■□□□□ 0.31
CRAMP1-204ENST00000466562 NME7Q9Y5B8 376 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 COL4A3Q01955 1670 aa17■□□□□ 0.31
CRAMP1-204ENST00000466562 GOLGA6L4A6NEF3 574 aa16.99■□□□□ 0.31
CRAMP1-204ENST00000466562 SHISA7A6NL88 538 aa16.99■□□□□ 0.31
CRAMP1-204ENST00000466562 ZNF263O14978 683 aa16.99■□□□□ 0.31
CRAMP1-204ENST00000466562 LRRN2O75325 713 aa16.99■□□□□ 0.31
CRAMP1-204ENST00000466562 GLULP15104 373 aa16.99■□□□□ 0.31
CRAMP1-204ENST00000466562 WEE1P30291 646 aa16.99■□□□□ 0.31
CRAMP1-204ENST00000466562 GNL1P36915 607 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms