RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 WDR59Q6PJI9 974 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 VPS52Q8N1B4 723 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 MICALL1Q8N3F8 863 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 SPATA4Q8NEY3 305 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 SPPL3Q8TCT6 385 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 TMC2Q8TDI7 906 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 MYLIPQ8WY64 445 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 P3H4Q92791 437 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 C18orf25Q96B23 403 aaPredicted RBP10.67□□□□□ -0.7
PMF1-204ENST00000466489 MFSD14AQ96MC6 490 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 RUNDC3BQ96NL0 473 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 TACO1Q9BSH4 297 aaKnown RBP10.67□□□□□ -0.7
PMF1-204ENST00000466489 EMILIN2Q9BXX0 1053 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 NSUN3Q9H649 340 aaKnown RBP10.67□□□□□ -0.7
PMF1-204ENST00000466489 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.67□□□□□ -0.7
PMF1-204ENST00000466489 MRPL17Q9NRX2 175 aaKnown RBP10.67□□□□□ -0.7
PMF1-204ENST00000466489 GOLGA6AQ9NYA3 693 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 TUBGCP4Q9UGJ1 667 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 ARMCX3Q9UH62 379 aaPredicted RBP10.67□□□□□ -0.7
PMF1-204ENST00000466489 PRRC2BQ5JSZ5 2229 aaKnown RBP10.67□□□□□ -0.7
PMF1-204ENST00000466489 A0A0A6YYK5 440 aaPredicted RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 TRIM49BA6NDI0 452 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 ERICH4A6NGS2 130 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 SYN3O14994 580 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 NCK2O43639 380 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 SEC31AO94979 1220 aaKnown RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 CSPG5O95196 566 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 CTSAP10619 480 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 POU3F3P20264 500 aaPredicted RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 TAF6P49848 677 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 VAMP7P51809 220 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 NAP1L1P55209 391 aaKnown RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 BFSP1Q12934 665 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 SLC18A3Q16572 532 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 FAM171A1Q5VUB5 890 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 TCERG1LQ5VWI1 586 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 PLPP4Q5VZY2 271 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 C9orf57Q5W0N0 161 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 C8orf74Q6P047 294 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 DSTYKQ6XUX3 929 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 SPRED2Q7Z698 418 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 CEP57Q86XR8 500 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 GPR65Q8IYL9 337 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 APPL2Q8NEU8 664 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 CCDC26Q8TAB7 109 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 HASPINQ8TF76 798 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 CHP1Q99653 195 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 HERC2P3Q9BVR0 1158 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 IMPG2Q9BZV3 1241 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 MTMR12Q9C0I1 747 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 STMN4Q9H169 189 aaPredicted RBP10.66□□□□□ -0.7
PMF1-204ENST00000466489 GOLGA2P5Q9HBQ8 144 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 MARCH5Q9NX47 278 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 MYO7AQ13402 2215 aa10.66□□□□□ -0.7
PMF1-204ENST00000466489 SCN1AP35498 2009 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 HMGB1P1B2RPK0 211 aaPredicted RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 H7C4K7 107 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 RFXAPO00287 272 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 B4GALT3O60512 393 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 SHOX2O60902 331 aaPredicted RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 N4BP1O75113 896 aaKnown RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 RNF40O75150 1001 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 AKAP3O75969 853 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 CXCL14O95715 111 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 ITGB3P05106 788 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 ODC1P11926 461 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 P4HA1P13674 534 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 POLR2BP30876 1174 aaKnown RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 CASP4P49662 377 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 LMNB2Q03252 620 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 GOLGA8FQ08AF8 430 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 GOLGA8DPQ0D2H9 430 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 DCAF17Q5H9S7 520 aaPredicted RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 MIIPQ5JXC2 388 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 LRIG3Q6UXM1 1119 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 ANKS3Q6ZW76 656 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 RRAGAQ7L523 313 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 TMEM173Q86WV6 379 aaPredicted RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 METTL23Q86XA0 190 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 CREG2Q8IUH2 290 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 LRRC52Q8N7C0 313 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 ZSWIM2Q8NEG5 633 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 PARD3BQ8TEW8 1205 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 GUCD1Q96NT3 240 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 PNKPQ96T60 521 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 CDCA3Q99618 268 aaPredicted RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 PAAF1Q9BRP4 392 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 TTPALQ9BTX7 342 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
PMF1-204ENST00000466489 ZBP1Q9H171 429 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 CXCL16Q9H2A7 254 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 TLE6Q9H808 572 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 FAM204AQ9H8W3 233 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 DPP7Q9UHL4 492 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 DSEQ9UL01 958 aa10.65□□□□□ -0.7
PMF1-204ENST00000466489 HPCAL4Q9UM19 191 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms