RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 EPM2AIP1Q7L775 607 aaPredicted RBP24.47■■□□□ 1.51
PTPN4-207ENST00000460162 ADGRF2Q8IZF7 708 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 ZBTB44Q8NCP5 570 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 FAM84AQ96KN4 292 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 FAM126AQ9BYI3 521 aaPredicted RBP24.47■■□□□ 1.51
PTPN4-207ENST00000460162 ZSCAN32Q9NX65 697 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 HSPBP1Q9NZL4 362 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 R3HCC1Q9Y3T6 440 aaKnown RBP24.47■■□□□ 1.51
PTPN4-207ENST00000460162 PTPRJQ12913 1337 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 PRPF40AO75400 957 aaKnown RBP24.46■■□□□ 1.51
PTPN4-207ENST00000460162 F13A1P00488 732 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 CSH1P0DML2 217 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 CSH2P0DML3 217 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 CCNE1P24864 410 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 DDX6P26196 483 aaKnown RBP eCLIP24.46■■□□□ 1.51
PTPN4-207ENST00000460162 KPNA1P52294 538 aaPredicted RBP24.46■■□□□ 1.51
PTPN4-207ENST00000460162 PLCB2Q00722 1185 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 PPP2R5DQ14738 602 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 CBWD2Q8IUF1 395 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 WDR49Q8IV35 697 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 SUMF1Q8NBK3 374 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 BPIFB1Q8TDL5 484 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 RUBCNQ92622 972 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 PKMYT1Q99640 499 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 C7orf25Q9BPX7 421 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 PI4K2AQ9BTU6 479 aa24.46■■□□□ 1.51
PTPN4-207ENST00000460162 ZNF638Q14966 1978 aaKnown RBP24.45■■□□□ 1.51
PTPN4-207ENST00000460162 SLC38A8A6NNN8 435 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 GABRDO14764 452 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 TNNC2P02585 160 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 HMGA1P17096 107 aaKnown RBP24.45■■□□□ 1.5
PTPN4-207ENST00000460162 PCSK1P29120 753 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 HOXD13P35453 343 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 LHX1P48742 406 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 NLRP12P59046 1061 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 RPL10AP62906 217 aaKnown RBP24.45■■□□□ 1.5
PTPN4-207ENST00000460162 LRRC32Q14392 662 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 FOXD4L5Q5VV16 416 aaPredicted RBP24.45■■□□□ 1.5
PTPN4-207ENST00000460162 LMBRD2Q68DH5 695 aaPredicted RBP24.45■■□□□ 1.5
PTPN4-207ENST00000460162 UNC13DQ70J99 1090 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 DPH6Q7L8W6 267 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 RALGPS2Q86X27 583 aaPredicted RBP24.45■■□□□ 1.5
PTPN4-207ENST00000460162 CELF5Q8N6W0 485 aaKnown RBP24.45■■□□□ 1.5
PTPN4-207ENST00000460162 ZNF507Q8TCN5 953 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 ATRIPQ8WXE1 791 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 FOXD4L4Q8WXT5 416 aaPredicted RBP24.45■■□□□ 1.5
PTPN4-207ENST00000460162 LRRC3BQ96PB8 259 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 HINFPQ9BQA5 517 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 LMAN1LQ9HAT1 526 aa24.45■■□□□ 1.5
PTPN4-207ENST00000460162 MYBPHLA2RUH7 354 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 SOBPA7XYQ1 873 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 LILRB5O75023 590 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 CHRNB1P11230 501 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 ACAT1P24752 427 aaKnown RBP24.44■■□□□ 1.5
PTPN4-207ENST00000460162 CTHP32929 405 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 CCR3P51677 355 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 SNRPFP62306 86 aaKnown RBP24.44■■□□□ 1.5
PTPN4-207ENST00000460162 EHHADHQ08426 723 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 DUOXA2Q1HG44 320 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 CFAP221Q4G0U5 840 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 ATL3Q6DD88 541 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 TMEM150AQ86TG1 271 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 OSTM1Q86WC4 334 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 CMTM8Q8IZV2 173 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 OR5B17Q8NGF7 314 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 FUBP3Q96I24 572 aaKnown RBP eCLIP24.44■■□□□ 1.5
PTPN4-207ENST00000460162 SLC46A2Q9BY10 475 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 KIF9Q9HAQ2 790 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 AGPAT3Q9NRZ7 376 aa24.44■■□□□ 1.5
PTPN4-207ENST00000460162 UXTQ9UBK9 157 aaPredicted RBP24.44■■□□□ 1.5
PTPN4-207ENST00000460162 SPECC1L-ADORA2AF8WAN1 911 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 POLR2DO15514 142 aaKnown RBP24.43■■□□□ 1.5
PTPN4-207ENST00000460162 F11P03951 625 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 AVPR1AP37288 418 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 GPR15P49685 360 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 SNRNP35Q16560 246 aaKnown RBP24.43■■□□□ 1.5
PTPN4-207ENST00000460162 SOWAHAQ2M3V2 549 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 SCARA3Q6AZY7 606 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 TSSK4Q6SA08 328 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 GPIHBP1Q8IV16 184 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 TRMT2BQ96GJ1 504 aaKnown RBP24.43■■□□□ 1.5
PTPN4-207ENST00000460162 HPDLQ96IR7 371 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 ZFYVE19Q96K21 471 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 EPC1Q9H2F5 836 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 THG1LQ9NWX6 298 aaKnown RBP24.43■■□□□ 1.5
PTPN4-207ENST00000460162 FAM13BQ9NYF5 915 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 GTSE1Q9NYZ3 720 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 PTPRDP23468 1912 aa24.43■■□□□ 1.5
PTPN4-207ENST00000460162 DMXL1Q9Y485 3027 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 TGFB1I1O43294 461 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 NOL4O94818 638 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 TDGF1P13385 188 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 ME1P48163 572 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 SOX9P48436 509 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 HS2ST1Q7LGA3 356 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 LIMS2Q7Z4I7 341 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 SPATA2LQ8IUW3 424 aaPredicted RBP24.42■■□□□ 1.5
PTPN4-207ENST00000460162 SCFD1Q8WVM8 642 aa24.42■■□□□ 1.5
PTPN4-207ENST00000460162 MRPS31Q92665 395 aaKnown RBP24.42■■□□□ 1.5
PTPN4-207ENST00000460162 GTF3C4Q9UKN8 822 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms