RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 TTC30BQ8N4P2 665 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 PSD3Q9NYI0 1048 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SLC25A13Q9UJS0 675 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 ITGB1BP2Q9UKP3 347 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 TBKBP1A7MCY6 615 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 MBL2P11226 248 aaPredicted RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 PTPRAP18433 802 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 HNRNPH1P31943 449 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 BLVRAP53004 296 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 AP2B1P63010 937 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 PDK1Q15118 436 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SPATA4Q8NEY3 305 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SNRNP27Q8WVK2 155 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 FBXO32Q969P5 355 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 TRAIPQ9BWF2 469 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 UPF3AQ9H1J1 476 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 SARS2Q9NP81 518 aaKnown RBP11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 KRT82Q9NSB4 513 aa11.2□□□□□ -0.62
AMBRA1-202ENST00000458649 UBA6A0AVT1 1052 aaPredicted RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 CYP26A1O43174 497 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 MED24O75448 989 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 CLCN3P51790 818 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 NPEPPSP55786 919 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 CES5AQ6NT32 575 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 HERC6Q8IVU3 1022 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 EXT2Q93063 718 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 SPATA16Q9BXB7 569 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 PITPNM3Q9BZ71 974 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 EPC1Q9H2F5 836 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 DDX4Q9NQI0 724 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 EVA1BQ9NVM1 165 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 OCRLQ01968 901 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 PRKCQQ04759 706 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 ZNF211Q13398 564 aaPredicted RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 TMCO5AQ8N6Q1 288 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 DDX47Q9H0S4 455 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 ETNK1Q9HBU6 452 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 SAYSD1Q9NPB0 183 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 FHOD1Q9Y613 1164 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 F5H5T6 163 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 H0Y626 953 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 COPEO14579 308 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 MAP3K13O43283 966 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 TBC1D12O60347 775 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 HSPA4LO95757 839 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 GEMIN4P57678 1058 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 PCBP1Q15365 356 aaKnown RBP eCLIP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 PTGISQ16647 500 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 KIZQ2M2Z5 673 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 APOBEC3HQ6NTF7 200 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 TTI2Q6NXR4 508 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 MFN1Q8IWA4 741 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 TSPAN17Q96FV3 270 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 TEX12Q9BXU0 123 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 AKAP12Q02952 1782 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 GNGT2O14610 69 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 SYNCRIPO60506 623 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 ITGB3P05106 788 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 NCAPHQ15003 741 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 GOLGA7BQ2TAP0 167 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 MFSD4BQ5TF39 518 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 SYDE1Q6ZW31 735 aaPredicted RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 NT5DC4Q86YG4 428 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 CALML6Q8TD86 181 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 TEKT4Q8WW24 435 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 BAZ2BQ9UIF8 2168 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-202ENST00000458649 PYGBP11216 843 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 GGCXP38435 758 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 SLCO1A2P46721 670 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 MTFR1Q15390 333 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 TINF2Q9BSI4 451 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 HEMGNQ9BXL5 484 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 CYP3A43Q9HB55 503 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 PARVBQ9HBI1 364 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 DBR1Q9UK59 544 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 SMAPO00193 183 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 WBP4O75554 376 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 COPS2P61201 443 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 CDR2Q01850 454 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 TMEM154Q6P9G4 183 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 NYAP1Q6ZVC0 841 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 CCDC80Q76M96 950 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 WDR18Q9BV38 432 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 AGO4Q9HCK5 861 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 NSMCE4AQ9NXX6 385 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 GAKO14976 1311 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 FAM187AA6NFU0 413 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 CYB561D2O14569 222 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 PDE5AO76074 875 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 KLRC2P26717 231 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 RGS7P49802 495 aa11.18□□□□□ -0.62
AMBRA1-202ENST00000458649 KLK7P49862 253 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms