RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 KAZNQ674X7 775 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 TXNRD3NBQ6F5E7 133 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 MTHFD1LQ6UB35 978 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 SLC4A11Q8NBS3 891 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 ADAM7Q9H2U9 754 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 MORF4L1Q9UBU8 362 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 TJP2Q9UDY2 1190 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 HMGXB4Q9UGU5 601 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 DRG1Q9Y295 367 aaKnown RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 C5orf60A6NFR6 353 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 BTBD19C9JJ37 291 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 GOLGA8SH3BPF8 625 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 STAU1O95793 577 aaKnown RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 ATF7P17544 494 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 CDKN2BP42772 138 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 HIBCHQ6NVY1 386 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 CEP128Q6ZU80 1094 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 ACSF2Q96CM8 615 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 SERPINB12Q96P63 405 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 TWNKQ96RR1 684 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
CCDC43-202ENST00000457422 EFR3BQ9Y2G0 817 aa17.6■□□□□ 0.41
CCDC43-202ENST00000457422 ANKRD65E5RJM6 399 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 TRIM66O15016 1216 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 TCEA3O75764 348 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 CETPP11597 493 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 KRT3P12035 628 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 P4HA1P13674 534 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 RFC1P35251 1148 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 IFI35P80217 286 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 IZUMO3Q5VZ72 239 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 MICALCLQ6ZW33 695 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 NT5DC4Q86YG4 428 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 MS4A4AQ96JQ5 239 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 ELOVL4Q9GZR5 314 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 C2CD2Q9Y426 696 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 RALGAPA2Q2PPJ7 1873 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 CCL15-CCL14A0A0B4J2E2 113 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 ACSL3O95573 720 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 SNAI1O95863 264 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 PSMA2P25787 234 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 SLCO1A2P46721 670 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 GCLCP48506 637 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 SLC25A11Q02978 314 aaKnown RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 ZNF268Q14587 947 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 CCL15Q16663 113 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 PRUNE1Q86TP1 453 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 ALLCQ8N6M5 410 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 NLRP7Q8WX94 980 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 NKD2Q969F2 451 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 XPO6Q96QU8 1125 aaKnown RBP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 CPXM1Q96SM3 734 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 ITGA11Q9UKX5 1188 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 DNPEPQ9ULA0 475 aa17.59■□□□□ 0.41
CCDC43-202ENST00000457422 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.59■□□□□ 0.41
CCDC43-202ENST00000457422 KAT6AQ92794 2004 aa17.58■□□□□ 0.41
CCDC43-202ENST00000457422 C3orf70A6NLC5 250 aaPredicted RBP17.58■□□□□ 0.4
CCDC43-202ENST00000457422 H3BRB1 525 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 TSPAN1O60635 241 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 CHN1P15882 459 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 MAGEA9P43362 315 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 GABRB2P47870 512 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 PSMC1P62191 440 aaKnown RBP17.58■□□□□ 0.4
CCDC43-202ENST00000457422 INCA1Q0VD86 236 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 TMEM132DQ14C87 1099 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 OASLQ15646 514 aaKnown RBP17.58■□□□□ 0.4
CCDC43-202ENST00000457422 TAOK1Q7L7X3 1001 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 GSTA5Q7RTV2 222 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 YTHDF3Q7Z739 585 aaKnown RBP17.58■□□□□ 0.4
CCDC43-202ENST00000457422 XYLT1Q86Y38 959 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 C10orf67Q8IYJ2 551 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 JOSD2Q8TAC2 188 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 MDM1Q8TC05 714 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 PWWP2AQ96N64 755 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
CCDC43-202ENST00000457422 NINJ2Q9NZG7 142 aa17.58■□□□□ 0.4
CCDC43-202ENST00000457422 A0A1B0GUA9 196 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 LRRD1A4D1F6 860 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 LRCH4O75427 683 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 ITGBL1O95965 494 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-202ENST00000457422 HMGCRP04035 888 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 KRT7P08729 469 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 VCPP55072 806 aaKnown RBP17.57■□□□□ 0.4
CCDC43-202ENST00000457422 ZNF410Q86VK4 478 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 ZCCHC9Q8N567 271 aaKnown RBP17.57■□□□□ 0.4
CCDC43-202ENST00000457422 IPO4Q8TEX9 1081 aaKnown RBP17.57■□□□□ 0.4
CCDC43-202ENST00000457422 ATXN2LQ8WWM7 1075 aaKnown RBP17.57■□□□□ 0.4
CCDC43-202ENST00000457422 BRI3BPQ8WY22 251 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 A0A087WUV0 522 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-202ENST00000457422 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 DNALI1O14645 258 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-202ENST00000457422 MICAL2O94851 1124 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 ERBB2P04626 1255 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 ITGAVP06756 1048 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 VDRP11473 427 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 GTF2A2P52657 109 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 GRIK4Q16099 956 aa17.57■□□□□ 0.4
CCDC43-202ENST00000457422 CNGA2Q16280 664 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms