RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 RAB6BQ9NRW1 208 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 MAPK13O15264 365 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 SPAG7O75391 227 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 SMIM10L2AP0DMW4 78 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 SMIM10L2BP0DMW5 78 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 VDRP11473 427 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 BRAFP15056 766 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 PSEN2P49810 448 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 PDE1BQ01064 536 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 DCAF4L1Q3SXM0 396 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 FAM117BQ6P1L5 589 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 MFSD7Q6UXD7 560 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 TTC39CQ8N584 583 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 MDM1Q8TC05 714 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 RXFP2Q8WXD0 754 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 SEMA4AQ9H3S1 761 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 STAP1Q9ULZ2 295 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 TNFSF13BQ9Y275 285 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 FNDC3AQ9Y2H6 1198 aaKnown RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 NEU2Q9Y3R4 380 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 MANSC4A6NHS7 340 aaPredicted RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 TRPA1O75762 1119 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 LCA5LO95447 670 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ATP4AP20648 1035 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ACO1P21399 889 aaKnown RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 RFC1P35251 1148 aaPredicted RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 SULT1E1P49888 294 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 PPP2R2AP63151 447 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ZNF200P98182 395 aaPredicted RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 FBXO47Q5MNV8 452 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 KLHL8Q9P2G9 620 aaPredicted RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 PPP1R37O75864 691 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 C4BPAP04003 597 aaKnown RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 ALDH3A1P30838 453 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 NFIL3Q16649 462 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 THEM5Q8N1Q8 247 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 FIZ1Q96SL8 496 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 ELAC2Q9BQ52 826 aaKnown RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 ASB7Q9H672 318 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 MINDY3Q9H8M7 445 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 APOBEC3GQ9HC16 384 aaKnown RBP11.13□□□□□ -0.63
CALD1-210ENST00000443197 NR2E1Q9Y466 385 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 PCDHA3Q9Y5H8 950 aa11.13□□□□□ -0.63
CALD1-210ENST00000443197 MYH8P13535 1937 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 CCDC78A2IDD5 438 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 CYB561D2O14569 222 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 ASS1P00966 412 aaKnown RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 SMPD1P17405 629 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 TSPY1Q01534 308 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 HEATR6Q6AI08 1181 aaKnown RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 KDELC2Q7Z4H8 507 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 FAM131BQ86XD5 332 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 GLT1D1Q96MS3 346 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 GOLGA2P5Q9HBQ8 144 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 CAPN7Q9Y6W3 813 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 SRCAPQ6ZRS2 3230 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 MICAL2O94851 1124 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 SLC4A1P02730 911 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 MT-ND3P03897 115 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 ITIH2P19823 946 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 MAMLD1Q13495 774 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 DUSP28Q4G0W2 176 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 PPM1NQ8N819 430 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 NSMCE1Q8WV22 266 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 GAD1Q99259 594 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 KLC2Q9H0B6 622 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 NXF3Q9H4D5 531 aaKnown RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 THSD7AQ9UPZ6 1657 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 E5RJQ4 531 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 HOXD10P28358 340 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 RPL21P46778 160 aaKnown RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 OR1G1P47890 313 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 HIF1AQ16665 826 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 ARL13BQ3SXY8 428 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 ACTL9Q8TC94 416 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 LRRC8CQ8TDW0 803 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 FAM172AQ8WUF8 416 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 HES6Q96HZ4 224 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
CALD1-210ENST00000443197 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
CALD1-210ENST00000443197 MYH10P35580 1976 aa11.11□□□□□ -0.63
CALD1-210ENST00000443197 TCRBV7S2A1N4TA0A589 114 aa11.11□□□□□ -0.63
CALD1-210ENST00000443197 NDC80O14777 642 aa11.11□□□□□ -0.63
CALD1-210ENST00000443197 APOL1O14791 398 aa11.11□□□□□ -0.63
CALD1-210ENST00000443197 GRIK1P39086 918 aa11.11□□□□□ -0.63
CALD1-210ENST00000443197 SV2CQ496J9 727 aa11.11□□□□□ -0.63
CALD1-210ENST00000443197 FYB2Q5VWT5 728 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms