RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 GIPC2Q8TF65 315 aa23.7■■□□□ 1.38
HDLBP-220ENST00000442730 SYT15Q9BQS2 421 aa23.7■■□□□ 1.38
HDLBP-220ENST00000442730 TBC1D17Q9HA65 648 aa23.7■■□□□ 1.38
HDLBP-220ENST00000442730 TRPV4Q9HBA0 871 aa23.7■■□□□ 1.38
HDLBP-220ENST00000442730 IL21Q9HBE4 155 aa23.7■■□□□ 1.38
HDLBP-220ENST00000442730 ZFP14Q9HCL3 533 aa23.7■■□□□ 1.38
HDLBP-220ENST00000442730 FRMD4BQ9Y2L6 1034 aa23.7■■□□□ 1.38
HDLBP-220ENST00000442730 NCANO14594 1321 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 CACNA1HO95180 2353 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 MYBPHLA2RUH7 354 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 NR2F2P24468 414 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 GABRR2P28476 465 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 ATICP31939 592 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 GPR15P49685 360 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 NUBP1P53384 320 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 PSMC1P62191 440 aaKnown RBP23.69■■□□□ 1.38
HDLBP-220ENST00000442730 TCF15Q12870 199 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 BIRC3Q13489 604 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 WDR72Q3MJ13 1102 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 CFAP221Q4G0U5 840 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 FAM171BQ6P995 826 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 MRPL45Q9BRJ2 306 aaKnown RBP23.69■■□□□ 1.38
HDLBP-220ENST00000442730 MKNK1Q9BUB5 465 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 GPR88Q9GZN0 384 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 SLITRK6Q9H5Y7 841 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 CRTAC1Q9NQ79 661 aa23.69■■□□□ 1.38
HDLBP-220ENST00000442730 COL4A3Q01955 1670 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 MAPK13O15264 365 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 PI15O43692 258 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 PHACTR2O75167 634 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 ATP2C2O75185 946 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 TACC1O75410 805 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 VNN1O95497 513 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 C4BPAP04003 597 aaKnown RBP23.68■■□□□ 1.38
HDLBP-220ENST00000442730 CYP2F1P24903 491 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 VIPR2P41587 438 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 TNNC1P63316 161 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 PFKPQ01813 784 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 C1orf220Q5T0J3 134 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 TMC2Q8TDI7 906 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 SYAP1Q96A49 352 aaPredicted RBP23.68■■□□□ 1.38
HDLBP-220ENST00000442730 FUBP3Q96I24 572 aaKnown RBP eCLIP23.68■■□□□ 1.38
HDLBP-220ENST00000442730 ATXN3LQ9H3M9 355 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 VRTNQ9H8Y1 702 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 RMND1Q9NWS8 449 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 CDH9Q9ULB4 789 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 NME7Q9Y5B8 376 aa23.68■■□□□ 1.38
HDLBP-220ENST00000442730 AKAP3O75969 853 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 HMGA1P17096 107 aaKnown RBP23.67■■□□□ 1.38
HDLBP-220ENST00000442730 PTPN5P54829 565 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 NHLH1Q02575 133 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 NCOA4Q13772 614 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 GRM2Q14416 872 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 ZNF699Q32M78 642 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 ZACNQ401N2 412 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 SDHAF4Q5VUM1 108 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 VITQ6UXI7 678 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 SPATA2LQ8IUW3 424 aaPredicted RBP23.67■■□□□ 1.38
HDLBP-220ENST00000442730 STKLD1Q8NE28 680 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 SPATA20Q8TB22 786 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 MYLPFQ96A32 169 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 TIGD1Q96MW7 591 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 CHMP5Q9NZZ3 219 aa23.67■■□□□ 1.38
HDLBP-220ENST00000442730 NXF1Q9UBU9 619 aaKnown RBP23.67■■□□□ 1.38
HDLBP-220ENST00000442730 GALR2O43603 387 aaPredicted RBP23.66■■□□□ 1.38
HDLBP-220ENST00000442730 RFX1P22670 979 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 CDC25CP30307 473 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 RPL10AP62906 217 aaKnown RBP23.66■■□□□ 1.38
HDLBP-220ENST00000442730 TAF12Q16514 161 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 DDR2Q16832 855 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 PHLDB3Q6NSJ2 640 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 C4orf50Q6ZRC1 276 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 ERCC4Q92889 916 aaPredicted RBP23.66■■□□□ 1.38
HDLBP-220ENST00000442730 RSPRY1Q96DX4 576 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 GSDMAQ96QA5 445 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 GCNAQ96QF7 691 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 SNX25Q9H3E2 840 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 SMYD3Q9H7B4 428 aa23.66■■□□□ 1.38
HDLBP-220ENST00000442730 PIEZO1Q92508 2521 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 IKBKBO14920 756 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 SMC2O95347 1197 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 PDGFRBP09619 1106 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 FAM163BP0C2L3 166 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 MAGEA11P43364 429 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 STARD6P59095 220 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 CYP4F8P98187 520 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 MAPRE1Q15691 268 aaKnown RBP23.65■■□□□ 1.38
HDLBP-220ENST00000442730 MLF2Q15773 248 aaPredicted RBP23.65■■□□□ 1.38
HDLBP-220ENST00000442730 ARHGAP15Q53QZ3 475 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 GPR158Q5T848 1215 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 TMEM150AQ86TG1 271 aa23.65■■□□□ 1.38
HDLBP-220ENST00000442730 DDX23Q9BUQ8 820 aaKnown RBP23.65■■□□□ 1.38
HDLBP-220ENST00000442730 COL4A2P08572 1712 aa23.64■■□□□ 1.38
HDLBP-220ENST00000442730 NOL4O94818 638 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 PSMC3P17980 439 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 RPL13P26373 211 aaKnown RBP23.64■■□□□ 1.37
HDLBP-220ENST00000442730 GNL1P36915 607 aaPredicted RBP23.64■■□□□ 1.37
HDLBP-220ENST00000442730 VAMP7P51809 220 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 NLRP12P59046 1061 aa23.64■■□□□ 1.37
HDLBP-220ENST00000442730 EDRF1Q3B7T1 1238 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms