RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 ITIH5Q86UX2 942 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 C12orf56Q8IXR9 622 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 TMEM86AQ8N2M4 240 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 DTWD2Q8NBA8 298 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 MKNK1Q9BUB5 465 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 SCAND2PQ9GZW5 306 aaPredicted RBP14.85□□□□□ -0.03
PRAME-209ENST00000439106 IL21Q9HBE4 155 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 R3HCC1Q9Y3T6 440 aaKnown RBP14.85□□□□□ -0.03
PRAME-209ENST00000439106 NME7Q9Y5B8 376 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 ATP6V1DQ9Y5K8 247 aa14.85□□□□□ -0.03
PRAME-209ENST00000439106 FAM186AA6NE01 2351 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 MYBPHLA2RUH7 354 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 HEPACAM2A8MVW5 462 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 GABRDO14764 452 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 GDI1P31150 447 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 TUFMP49411 452 aaKnown RBP14.84□□□□□ -0.03
PRAME-209ENST00000439106 STARD6P59095 220 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 DPYDQ12882 1025 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 BECN1Q14457 450 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 UBXN2BQ14CS0 331 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 VEPH1Q14D04 833 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 TAF12Q16514 161 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 DDR2Q16832 855 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 GPR158Q5T848 1215 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 PJA1Q8NG27 643 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 C2orf15Q8WU43 125 aaKnown RBP14.84□□□□□ -0.03
PRAME-209ENST00000439106 MMS19Q96T76 1030 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 ACBD6Q9BR61 282 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 MRPL45Q9BRJ2 306 aaKnown RBP14.84□□□□□ -0.03
PRAME-209ENST00000439106 SMG9Q9H0W8 520 aaKnown RBP14.84□□□□□ -0.03
PRAME-209ENST00000439106 KCTD10Q9H3F6 313 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 BRD9Q9H8M2 597 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 HSFX1Q9UBD0 423 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 USP25Q9UHP3 1055 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 MAGED2Q9UNF1 606 aaPredicted RBP14.84□□□□□ -0.03
PRAME-209ENST00000439106 MAPK8IP1Q9UQF2 711 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 ASB3Q9Y575 518 aa14.84□□□□□ -0.03
PRAME-209ENST00000439106 MYOFQ9NZM1 2061 aa14.83□□□□□ -0.03
PRAME-209ENST00000439106 A0A1W2PQ27 194 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 A0A1W2PQ64 194 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 A0A1W2PQD8 194 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 SHISA7A6NL88 538 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 LRRIQ3A6PVS8 624 aaPredicted RBP14.83□□□□□ -0.04
PRAME-209ENST00000439106 CLSTN1O94985 981 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 PRAMEF12O95522 483 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 PDGFRBP09619 1106 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 PSMC3P17980 439 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 MYL6P60660 151 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 SNRPFP62306 86 aaKnown RBP14.83□□□□□ -0.04
PRAME-209ENST00000439106 DLG4P78352 724 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 PFKPQ01813 784 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 PSMD2Q13200 908 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 ANGPT1Q15389 498 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 PHLDB3Q6NSJ2 640 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 ARID3BQ8IVW6 561 aaPredicted RBP14.83□□□□□ -0.04
PRAME-209ENST00000439106 MYLPFQ96A32 169 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 LRRC3BQ96PB8 259 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 SYT15Q9BQS2 421 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 TRMT61BQ9BVS5 477 aaKnown RBP14.83□□□□□ -0.04
PRAME-209ENST00000439106 CRTAC1Q9NQ79 661 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 DLGAP2Q9P1A6 1054 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 SIT1Q9Y3P8 196 aa14.83□□□□□ -0.04
PRAME-209ENST00000439106 KANSL1LA0AUZ9 987 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 ZNF202O95125 648 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 NR3C1P04150 777 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 HMGA1P17096 107 aaKnown RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 RAP1GAPP47736 663 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 LHX1P48742 406 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 NUBP1P53384 320 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 BIRC3Q13489 604 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 NFE2Q16621 373 aaPredicted RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 WDR72Q3MJ13 1102 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 TDRD10Q5VZ19 366 aaKnown RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 CEP135Q66GS9 1140 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 SCARA5Q6ZMJ2 495 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 LIMS2Q7Z4I7 341 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 TMEM150AQ86TG1 271 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 SPATA2LQ8IUW3 424 aaPredicted RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 SCN4BQ8IWT1 228 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 SMYD4Q8IYR2 804 aaPredicted RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 PARD3BQ8TEW8 1205 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 ZFYVE19Q96K21 471 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 DDX23Q9BUQ8 820 aaKnown RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 DPEP3Q9H4B8 488 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 LTB4R2Q9NPC1 389 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 DMAC2Q9NW81 257 aa14.82□□□□□ -0.04
PRAME-209ENST00000439106 CGNQ9P2M7 1197 aaKnown RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 NXF1Q9UBU9 619 aaKnown RBP14.82□□□□□ -0.04
PRAME-209ENST00000439106 PTPRZ1P23471 2315 aaPredicted RBP14.81□□□□□ -0.04
PRAME-209ENST00000439106 PHACTR2O75167 634 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 TADA3O75528 432 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 RHOBTB3O94955 611 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 MYL1P05976 194 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 WARSP23381 471 aaKnown RBP14.81□□□□□ -0.04
PRAME-209ENST00000439106 TARSP26639 723 aaKnown RBP14.81□□□□□ -0.04
PRAME-209ENST00000439106 PCSK1P29120 753 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 SOX9P48436 509 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 CYP27A1Q02318 531 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 PRKCQQ04759 706 aa14.81□□□□□ -0.04
PRAME-209ENST00000439106 SMARCB1Q12824 385 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms