RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 WDR19Q8NEZ3 1342 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 SYNJ2BP-COX16A0A087WUM0 186 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 DYTNA2CJ06 578 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 AVILO75366 819 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 TGFB3P10600 412 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 HOXA10P31260 410 aaPredicted RBP3.75□□□□□ -1.81
TOP2A-201ENST00000423485 ETFBP38117 255 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 IL12RB1P42701 662 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 PDX1P52945 283 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 SETMARQ53H47 684 aaPredicted RBP3.75□□□□□ -1.81
TOP2A-201ENST00000423485 C12orf60Q5U649 245 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 OGFOD2Q6N063 350 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 GPR156Q8NFN8 814 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 DNAJB3Q8WWF6 145 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 FBXO32Q969P5 355 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 DUSP23Q9BVJ7 150 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 BTBD1Q9H0C5 482 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 COX16Q9P0S2 106 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 SPASTQ9UBP0 616 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 CNOT8Q9UFF9 292 aaKnown RBP3.75□□□□□ -1.81
TOP2A-201ENST00000423485 ZKSCAN5Q9Y2L8 839 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 PIAS3Q9Y6X2 628 aa3.75□□□□□ -1.81
TOP2A-201ENST00000423485 MORC2Q9Y6X9 1032 aaPredicted RBP3.75□□□□□ -1.81
TOP2A-201ENST00000423485 UBA6A0AVT1 1052 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 KLK10O43240 276 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 VCAM1P19320 739 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 GLRBP48167 497 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 NLRP11P59045 1033 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 CDK18Q07002 472 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 SNW1Q13573 536 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 HLFQ16534 295 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 SLC44A4Q53GD3 710 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 EFCAB12Q6NXP0 572 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FBXL19Q6PCT2 694 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FIGLAQ6QHK4 219 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FAM47EQ6ZV65 393 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 HORMAD2Q8N7B1 307 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 TTC29Q8NA56 475 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FAM13CQ8NE31 585 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 GBP4Q96PP9 640 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 SLC38A3Q99624 504 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 DDX25Q9UHL0 483 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 USP15Q9Y4E8 981 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 PNMA6EA0A0J9YXQ4 647 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 BTBD17A6NE02 478 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 F5H6K3 240 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 K7ENM7 598 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FPGTO14772 594 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 PALMO75781 387 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 NR3C2P08235 984 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ALPIP09923 528 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF445P59923 1031 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ZXDAP98168 799 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 KLRC3Q07444 240 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF177Q13360 481 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 TBCCQ15814 346 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 THEMIS2Q5TEJ8 643 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 DENND2CQ68D51 928 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 SWSAP1Q6NVH7 229 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 CWC27Q6UX04 472 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 PTF1AQ7RTS3 328 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 KLHL7Q8IXQ5 586 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 LMNTD2Q8IXW0 634 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 DEFB124Q8NES8 71 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 LRRC15Q8TF66 581 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 POMGNT1Q8WZA1 660 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 MRPS27Q92552 414 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 CXorf40BQ96DE9 158 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FCRL3Q96P31 734 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ALG13Q9NP73 1137 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 DCP1AQ9NPI6 582 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FAM217BQ9NTX9 383 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 PRMT7Q9NVM4 692 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 PCDHGB5Q9Y5G0 923 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 TRIP11Q15643 1979 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ANKRD31Q8N7Z5 1873 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 A6NJR5 290 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 PRICKLE3O43900 615 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 CCNT1O60563 726 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 RNF40O75150 1001 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 FGF18O76093 207 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 BRAFP15056 766 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 DRD1P21728 446 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF280AP59817 542 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 COG7P83436 770 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 YWHAHQ04917 246 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 TAF8Q7Z7C8 310 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 LZTR1Q8N653 840 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF513Q8N8E2 541 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 PDCD6IPQ8WUM4 868 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 TCEANC2Q96MN5 208 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 GFM1Q96RP9 751 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 SEC62Q99442 399 aaKnown RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 HES7Q9BYE0 225 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 TMEM206Q9H813 350 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 GPN2Q9H9Y4 310 aaPredicted RBP3.74□□□□□ -1.81
TOP2A-201ENST00000423485 CTTNBP2NLQ9P2B4 639 aa3.74□□□□□ -1.81
TOP2A-201ENST00000423485 RABGEF1Q9UJ41 708 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms