RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 PDZD4Q76G19 769 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-211ENST00000420363 SV2AQ7L0J3 742 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 ITIH5Q86UX2 942 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 NPAS3Q8IXF0 933 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 SIX5Q8N196 739 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 TRIML1Q8N9V2 468 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 ITFG1Q8TB96 612 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 TAF4BQ92750 862 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 CORO1BQ9BR76 489 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 GDE1Q9NZC3 331 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 CDH9Q9ULB4 789 aa22.88■■□□□ 1.25
CPNE1-211ENST00000420363 ANHXE9PGG2 379 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 STK25O00506 426 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 VNN1O95497 513 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 AOC1P19801 751 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 CCNE1P24864 410 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 GTF2H1P32780 548 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 HTR4Q13639 388 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 CFAP221Q4G0U5 840 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 CYP4A22Q5TCH4 519 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 TTC9BQ8N6N2 239 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 PSMG2Q969U7 264 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 FUBP3Q96I24 572 aaKnown RBP eCLIP22.87■■□□□ 1.25
CPNE1-211ENST00000420363 IPO9Q96P70 1041 aaKnown RBP22.87■■□□□ 1.25
CPNE1-211ENST00000420363 MMS19Q96T76 1030 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 SYT15Q9BQS2 421 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 ABI2Q9NYB9 513 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-211ENST00000420363 SLC27A5Q9Y2P5 690 aa22.87■■□□□ 1.25
CPNE1-211ENST00000420363 PTPRDP23468 1912 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 PI15O43692 258 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 HAPLN1P10915 354 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-211ENST00000420363 NPR3P17342 541 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 NBL1P41271 181 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 VEPH1Q14D04 833 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 MAPRE1Q15691 268 aaKnown RBP22.86■■□□□ 1.25
CPNE1-211ENST00000420363 SGSM1Q2NKQ1 1148 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 MGAT5BQ3V5L5 792 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 ZNF667Q5HYK9 610 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 CWF19L1Q69YN2 538 aaKnown RBP22.86■■□□□ 1.25
CPNE1-211ENST00000420363 FAM171BQ6P995 826 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 MTSS1LQ765P7 747 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 TMC8Q8IU68 726 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 RSAD2Q8WXG1 361 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 SEPT5Q99719 369 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-211ENST00000420363 TMLHEQ9NVH6 421 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 WNT16Q9UBV4 365 aa22.86■■□□□ 1.25
CPNE1-211ENST00000420363 NARSO43776 548 aaKnown RBP22.85■■□□□ 1.25
CPNE1-211ENST00000420363 FGF19O95750 216 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 ASS1P00966 412 aaKnown RBP22.85■■□□□ 1.25
CPNE1-211ENST00000420363 TRIM49P0CI25 452 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 TRIM49CP0CI26 452 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 P4HA1P13674 534 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 ATF6P18850 670 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 BMP6P22004 513 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 ACAT1P24752 427 aaKnown RBP22.85■■□□□ 1.25
CPNE1-211ENST00000420363 PIK3CAP42336 1068 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 PMS1P54277 932 aaKnown RBP22.85■■□□□ 1.25
CPNE1-211ENST00000420363 ANKRD40Q6AI12 368 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 MRPL45Q9BRJ2 306 aaKnown RBP22.85■■□□□ 1.25
CPNE1-211ENST00000420363 LRRC3Q9BY71 257 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 TMEM8AQ9HCN3 771 aa22.85■■□□□ 1.25
CPNE1-211ENST00000420363 PTPRZ1P23471 2315 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-211ENST00000420363 TRIM49BA6NDI0 452 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 STX10O60499 249 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 CFHP08603 1231 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 CD44P16070 742 aaKnown RBP22.84■■□□□ 1.25
CPNE1-211ENST00000420363 CEBPBP17676 345 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 RFX1P22670 979 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 CCR2P41597 374 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 C4orf50Q6ZRC1 276 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 ASCL5Q7RTU5 278 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 SLC44A3Q8N4M1 653 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 GBP4Q96PP9 640 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 IMPG2Q9BZV3 1241 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 SNX25Q9H3E2 840 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 KIAA1468Q9P260 1216 aa22.84■■□□□ 1.25
CPNE1-211ENST00000420363 NXF1Q9UBU9 619 aaKnown RBP22.84■■□□□ 1.25
CPNE1-211ENST00000420363 BICDL2A1A5D9 508 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 PPP1R3GB7ZBB8 358 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 HCRTO43612 131 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 HLA-DRAP01903 254 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 LMO2P25791 158 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 MAGEA11P43364 429 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 GCLMP48507 274 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 PPP3CAQ08209 521 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 KRT39Q6A163 491 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 SPATA2LQ8IUW3 424 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-211ENST00000420363 HS6ST3Q8IZP7 471 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 ING5Q8WYH8 240 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 TCEAL4Q96EI5 215 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 CEP63Q96MT8 703 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 CRTAC1Q9NQ79 661 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 GTF3C4Q9UKN8 822 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 NUMBLQ9Y6R0 609 aa22.83■■□□□ 1.25
CPNE1-211ENST00000420363 MYBPHLA2RUH7 354 aa22.82■■□□□ 1.24
CPNE1-211ENST00000420363 MOSPD3O75425 235 aa22.82■■□□□ 1.24
CPNE1-211ENST00000420363 SOAT2O75908 522 aa22.82■■□□□ 1.24
CPNE1-211ENST00000420363 GNL1P36915 607 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-211ENST00000420363 MXI1P50539 228 aa22.82■■□□□ 1.24
CPNE1-211ENST00000420363 PSMC1P62191 440 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms