RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 STKLD1Q8NE28 680 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 GIPC2Q8TF65 315 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 NOC3LQ8WTT2 800 aaKnown RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 DEPDC1BQ8WUY9 529 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 KBTBD7Q8WVZ9 684 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 ACBD6Q9BR61 282 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 BRD9Q9H8M2 597 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 SLC39A2Q9NP94 309 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 DDX43Q9NXZ2 648 aaKnown RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-206ENST00000420121 SERTAD1Q9UHV2 236 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 HPSEQ9Y251 543 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 NME7Q9Y5B8 376 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 SNX9Q9Y5X1 595 aa11.87□□□□□ -0.51
SSBP3-206ENST00000420121 HUS1O60921 280 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 F11P03951 625 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 KRT19P08727 400 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 SP9P0CG40 484 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 ACAT1P24752 427 aaKnown RBP11.86□□□□□ -0.51
SSBP3-206ENST00000420121 WEE1P30291 646 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 CYP24A1Q07973 514 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 SNRNP35Q16560 246 aaKnown RBP11.86□□□□□ -0.51
SSBP3-206ENST00000420121 WDR44Q5JSH3 913 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 GPR158Q5T848 1215 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 ITIH5Q86UX2 942 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 WDR49Q8IV35 697 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 C12orf56Q8IXR9 622 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 DCP1BQ8IZD4 617 aaKnown RBP11.86□□□□□ -0.51
SSBP3-206ENST00000420121 ADGRF2Q8IZF7 708 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 KIAA0895Q8NCT3 520 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 SPATA18Q8TC71 538 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 PLEKHO2Q8TD55 490 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 IRF7Q92985 503 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 PI4K2AQ9BTU6 479 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 ATXN3LQ9H3M9 355 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 SLITRK6Q9H5Y7 841 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 GTF3C4Q9UKN8 822 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 PCDHB5Q9Y5E4 795 aa11.86□□□□□ -0.51
SSBP3-206ENST00000420121 MYO16Q9Y6X6 1858 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 DMXL1Q9Y485 3027 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-206ENST00000420121 FAM237AA0A1B0GTK4 181 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 MYBPHLA2RUH7 354 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 ATP2C2O75185 946 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 TADA3O75528 432 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 CST3P01034 146 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-206ENST00000420121 SLFN14P0C7P3 912 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 PFKFB1P16118 471 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 CYP2F1P24903 491 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 RPS9P46781 194 aaKnown RBP11.85□□□□□ -0.51
SSBP3-206ENST00000420121 CYP2J2P51589 502 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 SNRPFP62306 86 aaKnown RBP11.85□□□□□ -0.51
SSBP3-206ENST00000420121 TSPY1Q01534 308 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 STK4Q13043 487 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 VEPH1Q14D04 833 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 PSMD6Q15008 389 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 SURF1Q15526 300 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 NFE2Q16621 373 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-206ENST00000420121 DUOXA2Q1HG44 320 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 SDHAF4Q5VUM1 108 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 FAM171BQ6P995 826 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 XXYLT1Q8NBI6 393 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 RDH13Q8NBN7 331 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 RIN3Q8TB24 985 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-206ENST00000420121 E2F7Q96AV8 911 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 PAGE5Q96GU1 130 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 HPDLQ96IR7 371 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 CGRRF1Q99675 332 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 SLC46A2Q9BY10 475 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 TASP1Q9H6P5 420 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 KIAA1586Q9HCI6 787 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 ABCB6Q9NP58 842 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 OBP2AQ9NY56 170 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 R4GN57 208 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 KIAA1549LQ6ZVL6 1849 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 GPR179Q6PRD1 2367 aa11.85□□□□□ -0.51
SSBP3-206ENST00000420121 DCHS1Q96JQ0 3298 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
SSBP3-206ENST00000420121 ZNF263O14978 683 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 CHADO15335 359 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 PRPF40AO75400 957 aaKnown RBP11.84□□□□□ -0.51
SSBP3-206ENST00000420121 FGF19O95750 216 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 TNNC2P02585 160 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 CMA1P23946 247 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 LMO2P25791 158 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 CDC25CP30307 473 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 MAGEA9P43362 315 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 LHX1P48742 406 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 NLRP12P59046 1061 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 MYL7Q01449 175 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms