RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SYT15Q9BQS2 421 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 MRPL45Q9BRJ2 306 aaKnown RBP21.75■■□□□ 1.07
GTF3A-202ENST00000419181 PI4K2AQ9BTU6 479 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 GTPBP4Q9BZE4 634 aaKnown RBP21.75■■□□□ 1.07
GTF3A-202ENST00000419181 SLC2A4RGQ9NR83 387 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 WNT16Q9UBV4 365 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 CDH9Q9ULB4 789 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 MYBPHLA2RUH7 354 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 ECI2O75521 394 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 CFHP08603 1231 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 FCARP24071 287 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 PSMC2P35998 433 aaKnown RBP21.74■■□□□ 1.07
GTF3A-202ENST00000419181 ENPEPQ07075 957 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 TEAD2Q15562 447 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 ZNF699Q32M78 642 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 CFAP221Q4G0U5 840 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 FAM78AQ5JUQ0 283 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 GAREM2Q75VX8 874 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 SV2AQ7L0J3 742 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 FAM186BQ8IYM0 893 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 FAM200AQ8TCP9 573 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 ZSWIM3Q96MP5 696 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 ASB16Q96NS5 453 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 KCNH6Q9H252 994 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 FBXL21Q9UKT6 434 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 NME7Q9Y5B8 376 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 PTPRDP23468 1912 aa21.74■■□□□ 1.07
GTF3A-202ENST00000419181 A0A1W2PRU2 124 aa21.73■■□□□ 1.07
GTF3A-202ENST00000419181 ATP2C2O75185 946 aa21.73■■□□□ 1.07
GTF3A-202ENST00000419181 FGF19O95750 216 aa21.73■■□□□ 1.07
GTF3A-202ENST00000419181 MCCD1P59942 119 aaPredicted RBP21.73■■□□□ 1.07
GTF3A-202ENST00000419181 PSMC1P62191 440 aaKnown RBP21.73■■□□□ 1.07
GTF3A-202ENST00000419181 GPR152Q8TDT2 470 aa21.73■■□□□ 1.07
GTF3A-202ENST00000419181 FUBP3Q96I24 572 aaKnown RBP eCLIP21.73■■□□□ 1.07
GTF3A-202ENST00000419181 MKNK1Q9BUB5 465 aa21.73■■□□□ 1.07
GTF3A-202ENST00000419181 CRTAC1Q9NQ79 661 aa21.73■■□□□ 1.07
GTF3A-202ENST00000419181 NXF1Q9UBU9 619 aaKnown RBP21.73■■□□□ 1.07
GTF3A-202ENST00000419181 WDFY4Q6ZS81 3184 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 PDGFRBP09619 1106 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 CYP2F1P24903 491 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 GNL1P36915 607 aaPredicted RBP21.72■■□□□ 1.07
GTF3A-202ENST00000419181 GPR15P49685 360 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 VCPP55072 806 aaKnown RBP21.72■■□□□ 1.07
GTF3A-202ENST00000419181 GPC5P78333 572 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 MAPRE1Q15691 268 aaKnown RBP21.72■■□□□ 1.07
GTF3A-202ENST00000419181 ZNF667Q5HYK9 610 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 TANGO2Q6ICL3 276 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 SPATA2LQ8IUW3 424 aaPredicted RBP21.72■■□□□ 1.07
GTF3A-202ENST00000419181 ADSSL1Q8N142 457 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 SIX5Q8N196 739 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 GIPC2Q8TF65 315 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 SMARCD2Q92925 531 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 ELSPBP1Q96BH3 223 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 GPR88Q9GZN0 384 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 SNX25Q9H3E2 840 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 IL21Q9HBE4 155 aa21.72■■□□□ 1.07
GTF3A-202ENST00000419181 DENND4CQ5VZ89 1909 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 KRBA1A5PL33 1030 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 TRIM49P0CI25 452 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 TRIM49CP0CI26 452 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 KRT13P13646 458 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 HMGA1P17096 107 aaKnown RBP21.71■■□□□ 1.07
GTF3A-202ENST00000419181 GABRR2P28476 465 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 PMS1P54277 932 aaKnown RBP21.71■■□□□ 1.07
GTF3A-202ENST00000419181 RPL10AP62906 217 aaKnown RBP21.71■■□□□ 1.07
GTF3A-202ENST00000419181 PPP3CAQ08209 521 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 C4orf50Q6ZRC1 276 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 ZC3H3Q8IXZ2 948 aaKnown RBP21.71■■□□□ 1.07
GTF3A-202ENST00000419181 OR6B3Q8NGW1 331 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 ZSCAN18Q8TBC5 510 aaPredicted RBP21.71■■□□□ 1.07
GTF3A-202ENST00000419181 MYLPFQ96A32 169 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 EEF2KMTQ96G04 330 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 PLA2G2FQ9BZM2 168 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 MFSD1Q9H3U5 465 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 SMYD3Q9H7B4 428 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 TRPV4Q9HBA0 871 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 ZFP14Q9HCL3 533 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 MAN1B1Q9UKM7 699 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 OBSL1O75147 1896 aa21.71■■□□□ 1.07
GTF3A-202ENST00000419181 NUP210Q8TEM1 1887 aaPredicted RBP21.71■■□□□ 1.07
GTF3A-202ENST00000419181 CETN3O15182 167 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 ASS1P00966 412 aaKnown RBP21.7■■□□□ 1.06
GTF3A-202ENST00000419181 NPR3P17342 541 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 AVPR2P30518 371 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 MAGEA11P43364 429 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 GCLMP48507 274 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 UBE2HP62256 183 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 TAF12Q16514 161 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 DDR2Q16832 855 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 SGSM1Q2NKQ1 1148 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 STXBP5Q5T5C0 1151 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 CWF19L1Q69YN2 538 aaKnown RBP21.7■■□□□ 1.06
GTF3A-202ENST00000419181 ANKRD40Q6AI12 368 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 MYCBPAPQ8TBZ2 947 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 TAF4BQ92750 862 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 ELMO3Q96BJ8 720 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 TSG101Q99816 390 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 ATXN3LQ9H3M9 355 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 SLITRK6Q9H5Y7 841 aa21.7■■□□□ 1.06
GTF3A-202ENST00000419181 GREB1Q4ZG55 1949 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms