RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PPM1LQ5SGD2 360 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 LRRTM3Q86VH5 581 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 OSTM1Q86WC4 334 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 MLKLQ8NB16 471 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 KBTBD7Q8WVZ9 684 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 SMG7Q92540 1137 aaKnown RBP11.27□□□□□ -0.61
RFC1-203ENST00000418436 TAF4BQ92750 862 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 MED15Q96RN5 788 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 PKMYT1Q99640 499 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 ACBD6Q9BR61 282 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 TMEM8AQ9HCN3 771 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 WDR6Q9NNW5 1121 aaKnown RBP11.27□□□□□ -0.61
RFC1-203ENST00000418436 CD320Q9NPF0 282 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 DDX43Q9NXZ2 648 aaKnown RBP11.27□□□□□ -0.61
RFC1-203ENST00000418436 HSFX1Q9UBD0 423 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 RWDD2AQ9UIY3 292 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 CTNND2Q9UQB3 1225 aa11.27□□□□□ -0.61
RFC1-203ENST00000418436 MTMR11A4FU01 709 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 STX10O60499 249 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 MBD3O95983 291 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 ASS1P00966 412 aaKnown RBP11.26□□□□□ -0.61
RFC1-203ENST00000418436 HLA-DRAP01903 254 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 CD46P15529 392 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 ELF1P32519 619 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 MARSP56192 900 aaKnown RBP11.26□□□□□ -0.61
RFC1-203ENST00000418436 STX17P56962 302 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 NLRP12P59046 1061 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 MYL7Q01449 175 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 SMARCB1Q12824 385 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 KRT39Q6A163 491 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 FRMD5Q7Z6J6 570 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 ADGRF2Q8IZF7 708 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 TAS1R2Q8TE23 839 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 C2orf15Q8WU43 125 aaKnown RBP11.26□□□□□ -0.61
RFC1-203ENST00000418436 CRISPLD1Q9H336 500 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 METTL14Q9HCE5 456 aaKnown RBP11.26□□□□□ -0.61
RFC1-203ENST00000418436 ARMCX3Q9UH62 379 aaPredicted RBP11.26□□□□□ -0.61
RFC1-203ENST00000418436 USTQ9Y2C2 406 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 NME7Q9Y5B8 376 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 INSL5Q9Y5Q6 135 aa11.26□□□□□ -0.61
RFC1-203ENST00000418436 PTPRDP23468 1912 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 DOCK8Q8NF50 2099 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 RNF223E7ERA6 249 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 PRRG1O14668 218 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 CCL16O15467 120 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 XYLBO75191 536 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 LMO2P25791 158 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 TNNC1P63316 161 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 TSPY1Q01534 308 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 DUSP4Q13115 394 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 SLC39A12Q504Y0 691 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 ZNF667Q5HYK9 610 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 INTS6LQ5JSJ4 861 aaKnown RBP11.25□□□□□ -0.61
RFC1-203ENST00000418436 FAM171BQ6P995 826 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
RFC1-203ENST00000418436 GJD3Q8N144 294 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 ATAD1Q8NBU5 361 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 SLC35C1Q96A29 364 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 PGLYRP2Q96PD5 576 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 MMS19Q96T76 1030 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 MRPL45Q9BRJ2 306 aaKnown RBP11.25□□□□□ -0.61
RFC1-203ENST00000418436 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
RFC1-203ENST00000418436 PIDD1Q9HB75 910 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 TMLHEQ9NVH6 421 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
RFC1-203ENST00000418436 POLIQ9UNA4 740 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 COQ4Q9Y3A0 265 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 CLUHO75153 1309 aa11.25□□□□□ -0.61
RFC1-203ENST00000418436 PMM2O15305 246 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 HCRTO43612 131 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 GNA14O95837 355 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 S1PR4O95977 384 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 LRG1P02750 347 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 ACAT1P24752 427 aaKnown RBP11.24□□□□□ -0.61
RFC1-203ENST00000418436 PCSK1P29120 753 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 GNL1P36915 607 aaPredicted RBP11.24□□□□□ -0.61
RFC1-203ENST00000418436 PIK3CAP42336 1068 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 MXI1P50539 228 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
RFC1-203ENST00000418436 CBWD6Q4V339 395 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 CT47A1Q5JQC4 288 aaPredicted RBP11.24□□□□□ -0.61
RFC1-203ENST00000418436 CBWD3Q5JTY5 395 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 CBWD5Q5RIA9 395 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 GRASPQ7Z6J2 395 aaPredicted RBP11.24□□□□□ -0.61
RFC1-203ENST00000418436 TRIM59Q8IWR1 403 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 FBXL13Q8NEE6 735 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 SPPL2BQ8TCT7 592 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 SEMA4DQ92854 862 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 ELMO3Q96BJ8 720 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 FAXDC2Q96IV6 333 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 RPGRIP1Q96KN7 1286 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 SDCBP2Q9H190 292 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 AVENQ9NQS1 362 aaPredicted RBP11.24□□□□□ -0.61
RFC1-203ENST00000418436 DNMT3BQ9UBC3 853 aaKnown RBP11.24□□□□□ -0.61
RFC1-203ENST00000418436 CDH9Q9ULB4 789 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 SLC27A5Q9Y2P5 690 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 NR2E1Q9Y466 385 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms