RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZNF606Q8WXB4 792 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 RSPH1Q8WYR4 309 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 TMEM176AQ96HP8 235 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
SHMT2-202ENST00000414700 EPC1Q9H2F5 836 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 CWH43Q9H720 699 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 MARCH5Q9NX47 278 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 PPP2R2CQ9Y2T4 447 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 CCDC151A5D8V7 595 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 RCCD1A6NED2 376 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 TMCO5BA8MYB1 307 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 MAP2K7O14733 419 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 THAP12O43422 761 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 LCA5LO95447 670 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 GALTP07902 379 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 ACAT1P24752 427 aaKnown RBP16.5■□□□□ 0.23
SHMT2-202ENST00000414700 MAGEA9P43362 315 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 CDR2Q01850 454 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 LONRF2Q1L5Z9 754 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-202ENST00000414700 ACOT1Q86TX2 421 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 BCL7CQ8WUZ0 217 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-202ENST00000414700 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-202ENST00000414700 NAGPAQ9UK23 515 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 STXBP5LQ9Y2K9 1186 aa16.5■□□□□ 0.23
SHMT2-202ENST00000414700 KIAA1671Q9BY89 1806 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 A8MXQ7 604 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 M0QZQ0 153 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 ALDH2P05091 517 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 CD19P15391 556 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 TNFAIP3P21580 790 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 GNL1P36915 607 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-202ENST00000414700 GYS2P54840 703 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 TTC31Q49AM3 519 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-202ENST00000414700 DPH6Q7L8W6 267 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 SUSD3Q96L08 255 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-202ENST00000414700 NT5C1AQ9BXI3 368 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 PACSIN1Q9BY11 444 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 NENFQ9UMX5 172 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 MYH10P35580 1976 aa16.49■□□□□ 0.23
SHMT2-202ENST00000414700 GABRDO14764 452 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 ATP2C2O75185 946 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 GJB5O95377 273 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 BPIFB4P59827 614 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 BTG3Q14201 252 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-202ENST00000414700 KIAA0319Q5VV43 1072 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 ALKBH5Q6P6C2 394 aaKnown RBP16.48■□□□□ 0.23
SHMT2-202ENST00000414700 B3GALT6Q96L58 329 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
SHMT2-202ENST00000414700 YME1L1Q96TA2 773 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 GPR62Q9BZJ7 368 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 ADAM28Q9UKQ2 775 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 FAN1Q9Y2M0 1017 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 TMEM189-UBE2V1I3L0A0 370 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 CCDC175P0C221 793 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
SHMT2-202ENST00000414700 PSMC1P62191 440 aaKnown RBP16.48■□□□□ 0.23
SHMT2-202ENST00000414700 HERVK_113Q902F9 699 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 RTP3Q9BQQ7 232 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 LACRTQ9GZZ8 138 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 FAM49BQ9NUQ9 324 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 DDX43Q9NXZ2 648 aaKnown RBP16.48■□□□□ 0.23
SHMT2-202ENST00000414700 TRIM10Q9UDY6 481 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
SHMT2-202ENST00000414700 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
SHMT2-202ENST00000414700 TADA2AO75478 443 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 PAEPP09466 180 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 ODC1P11926 461 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 TKTP29401 623 aaKnown RBP16.47■□□□□ 0.23
SHMT2-202ENST00000414700 SPA17Q15506 151 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 C9orf50Q5SZB4 431 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 CCDC122Q5T0U0 273 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 VPS36Q86VN1 386 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 ZBTB9Q96C00 473 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 CYFIP2Q96F07 1278 aa16.47■□□□□ 0.23
SHMT2-202ENST00000414700 CHRM1P11229 460 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 ALDH7A1P49419 539 aaKnown RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 GNG11P61952 73 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 PPP1R26Q5T8A7 1209 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 UNC93AQ86WB7 457 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 HNRNPLLQ8WVV9 542 aaKnown RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 FAM124BQ9H5Z6 455 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 DUSP10Q9Y6W6 482 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 IPO7O95373 1038 aaKnown RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 CYP11A1P05108 521 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 MAGEA10P43363 369 aaPredicted RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 C2CD6Q53TS8 623 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
SHMT2-202ENST00000414700 ZNF677Q86XU0 584 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 TMEM86AQ8N2M4 240 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 TTC39CQ8N584 583 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 TMEM175Q9BSA9 504 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 LZTFL1Q9NQ48 299 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 SLC4A7Q9Y6M7 1214 aa16.46■□□□□ 0.23
SHMT2-202ENST00000414700 PDE4DIPQ5VU43 2346 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms