RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 PRSS33Q8NF86 280 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 ZSCAN18Q8TBC5 510 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-211ENST00000413354 TMC2Q8TDI7 906 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 DEPDC1BQ8WUY9 529 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 KBTBD7Q8WVZ9 684 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 SYT15Q9BQS2 421 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 GTPBP4Q9BZE4 634 aaKnown RBP16.81■□□□□ 0.28
MCF2L-211ENST00000413354 TBC1D17Q9HA65 648 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 TRPV4Q9HBA0 871 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 TMLHEQ9NVH6 421 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 CACNA1HO95180 2353 aa16.81■□□□□ 0.28
MCF2L-211ENST00000413354 LRRIQ3A6PVS8 624 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-211ENST00000413354 GALR2O43603 387 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-211ENST00000413354 TACC1O75410 805 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 CLSTN1O94985 981 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 SMC2O95347 1197 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 CSH1P0DML2 217 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 CSH2P0DML3 217 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 GJA1P17302 382 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 NPR3P17342 541 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 FCARP24071 287 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 NR2F2P24468 414 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 GABRR2P28476 465 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 PRKCQQ04759 706 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 MLF2Q15773 248 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-211ENST00000413354 WDR72Q3MJ13 1102 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 CFAP221Q4G0U5 840 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 TANGO2Q6ICL3 276 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-211ENST00000413354 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 DNASE1L2Q92874 299 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 TIGD1Q96MW7 591 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 PKMYT1Q99640 499 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 PI4K2AQ9BTU6 479 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-211ENST00000413354 SNX25Q9H3E2 840 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 ATXN3LQ9H3M9 355 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 VRTNQ9H8Y1 702 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-211ENST00000413354 GTF3C4Q9UKN8 822 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 GREB1Q4ZG55 1949 aa16.8■□□□□ 0.28
MCF2L-211ENST00000413354 TICRRQ7Z2Z1 1910 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 CST3P01034 146 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-211ENST00000413354 MAGEA11P43364 429 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 CASP4P49662 377 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 NHLH1Q02575 133 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 ENPEPQ07075 957 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 PNOCQ13519 176 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 NCOA4Q13772 614 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 ZNF699Q32M78 642 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 TDRD10Q5VZ19 366 aaKnown RBP16.79■□□□□ 0.28
MCF2L-211ENST00000413354 FAM171BQ6P995 826 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
MCF2L-211ENST00000413354 GAREM2Q75VX8 874 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 PLEKHO2Q8TD55 490 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 TRMT61BQ9BVS5 477 aaKnown RBP16.79■□□□□ 0.28
MCF2L-211ENST00000413354 UXTQ9UBK9 157 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-211ENST00000413354 MAPK8IP1Q9UQF2 711 aa16.79■□□□□ 0.28
MCF2L-211ENST00000413354 NRG2O14511 850 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-211ENST00000413354 IKBKBO14920 756 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 KRT13P13646 458 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 P4HA1P13674 534 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 PSMC3P17980 439 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 DDX6P26196 483 aaKnown RBP eCLIP16.78■□□□□ 0.28
MCF2L-211ENST00000413354 GNL1P36915 607 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-211ENST00000413354 STARD6P59095 220 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 MYL6P60660 151 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 EDRF1Q3B7T1 1238 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 SLC44A4Q53GD3 710 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 ZNF667Q5HYK9 610 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 GPR158Q5T848 1215 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 POTEHQ6S545 545 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 ENGASEQ8NFI3 743 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 OR6B3Q8NGW1 331 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 IRF7Q92985 503 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 CEP295NLQ96MC4 621 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 ZSWIM3Q96MP5 696 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 PLA2G2FQ9BZM2 168 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 XYLT2Q9H1B5 865 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 TASP1Q9H6P5 420 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 BRD9Q9H8M2 597 aa16.78■□□□□ 0.28
MCF2L-211ENST00000413354 MAGEC2Q9UBF1 373 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-211ENST00000413354 MYH10P35580 1976 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 MYBPHLA2RUH7 354 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 DPYSL4O14531 572 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 C4BPAP04003 597 aaKnown RBP16.77■□□□□ 0.28
MCF2L-211ENST00000413354 CYP2F1P24903 491 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 WEE1P30291 646 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
MCF2L-211ENST00000413354 VAMP7P51809 220 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 CDR1P51861 262 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 PSMC1P62191 440 aaKnown RBP16.77■□□□□ 0.28
MCF2L-211ENST00000413354 TCF15Q12870 199 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 GRM2Q14416 872 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 ZACNQ401N2 412 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 COBLL1Q53SF7 1204 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 VSTM1Q6UX27 236 aa16.77■□□□□ 0.28
MCF2L-211ENST00000413354 VITQ6UXI7 678 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms