RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZNF529Q6P280 563 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 DOK3Q7L591 496 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 MOGAT3Q86VF5 341 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 LSMEM1Q8N8F7 131 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 SYT8Q8NBV8 401 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 NLGN4YQ8NFZ3 816 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-204ENST00000412061 SLC35B2Q8TB61 432 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 ADAMTS18Q8TE60 1221 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 RUBCNQ92622 972 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 TNPO1Q92973 898 aaKnown RBP5.16□□□□□ -1.58
BRCA1-204ENST00000412061 SUCLG2Q96I99 432 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 PLA2G12BQ9BX93 195 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 OLA1Q9NTK5 396 aaKnown RBP5.16□□□□□ -1.58
BRCA1-204ENST00000412061 NKIRAS2Q9NYR9 191 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 MYO1AQ9UBC5 1043 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 HDAC5Q9UQL6 1122 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 TCRBV7S2A1N4TA0A589 114 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 SYNDIG1LA6NDD5 238 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 AQP12BA6NM10 295 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 TBKBP1A7MCY6 615 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 TRIM13O60858 407 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 SOAT2O75908 522 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 POMCP01189 267 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 AHSGP02765 367 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 AMHP03971 560 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 SBK3P0C264 359 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 NPR1P16066 1061 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 ZEB1P37275 1124 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-204ENST00000412061 CLNS1AP54105 237 aaKnown RBP5.15□□□□□ -1.59
BRCA1-204ENST00000412061 SOX8P57073 446 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 RAP2BP61225 183 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 DUSP8Q13202 625 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 GRM7Q14831 915 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 TAF11Q15544 211 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 BMT2Q1RMZ1 405 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 C3orf38Q5JPI3 329 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 ANKRD45Q5TZF3 282 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 EMC10Q5UCC4 262 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 TMCO3Q6UWJ1 677 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 NEK10Q6ZWH5 1172 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 FRMD5Q7Z6J6 570 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 FAM83AQ86UY5 434 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 TAX1BP1Q86VP1 789 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 ZFP28Q8NHY6 868 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 RRP36Q96EU6 259 aaKnown RBP5.15□□□□□ -1.59
BRCA1-204ENST00000412061 TMEM176AQ96HP8 235 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 MSLNLQ96KJ4 702 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 MRGPRX1Q96LB2 322 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 OR14A2Q96R54 314 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 SDF4Q9BRK5 362 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 PYM1Q9BRP8 204 aaKnown RBP5.15□□□□□ -1.59
BRCA1-204ENST00000412061 NDC1Q9BTX1 674 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 BRIP1Q9BX63 1249 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 LMAN2LQ9H0V9 348 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 MEGF9Q9H1U4 602 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 SLAMF7Q9NQ25 335 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 SACM1LQ9NTJ5 587 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 RLIMQ9NVW2 624 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 CFAP97Q9P2B7 532 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 KIF17Q9P2E2 1029 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 CLCA2Q9UQC9 943 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 MAN2B2Q9Y2E5 1009 aa5.15□□□□□ -1.59
BRCA1-204ENST00000412061 MAGED1Q9Y5V3 778 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-204ENST00000412061 PRR5-ARHGAP8B1AHC4 643 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 HNRNPDLO14979 420 aaKnown RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 SLC43A1O75387 559 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 HAUS5O94927 633 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 MATN4O95460 622 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 INHBBP09529 407 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 GNAT2P19087 354 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 EN2P19622 333 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 KCNJ5P48544 419 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 ATXN1P54253 815 aaKnown RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 NR1H2P55055 460 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 NAP1L1P55209 391 aaKnown RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 HTRA4P83105 476 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 PTK2BQ14289 1009 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 MFSD4BQ5TF39 518 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 ANKS6Q68DC2 871 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 UBE3BQ7Z3V4 1068 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 XYLT1Q86Y38 959 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 C1QL4Q86Z23 238 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 CPOQ8IVL8 374 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 FTSJ3Q8IY81 847 aaKnown RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 AOPEPQ8N6M6 819 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 CELF5Q8N6W0 485 aaKnown RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 KBTBD7Q8WVZ9 684 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 HTRA1Q92743 480 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 TFAP2CQ92754 450 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 RILPL2Q969X0 211 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 MPHOSPH9Q99550 1183 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 CPPED1Q9BRF8 314 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 LSM14BQ9BX40 385 aaKnown RBP5.14□□□□□ -1.59
BRCA1-204ENST00000412061 JMJD4Q9H9V9 463 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 STK32BQ9NY57 414 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 PLA2G3Q9NZ20 509 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 FAM30AQ9NZY2 134 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 JKAMPQ9P055 326 aa5.14□□□□□ -1.59
BRCA1-204ENST00000412061 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms