RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ACOT1Q86TX2 421 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 B3GALNT2Q8NCR0 500 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 ZNF461Q8TAF7 563 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 MYCBPAPQ8TBZ2 947 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 GDPD5Q8WTR4 605 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 LRCH3Q96II8 777 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 TMEM209Q96SK2 561 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 EMILIN2Q9BXX0 1053 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 DPEP3Q9H4B8 488 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 GTF3C4Q9UKN8 822 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 CDY1Q9Y6F8 540 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 CHD7Q9P2D1 2997 aa16.2■□□□□ 0.18
LSM5-207ENST00000410044 COL4A4P53420 1690 aaPredicted RBP16.19■□□□□ 0.18
LSM5-207ENST00000410044 MYBPHLA2RUH7 354 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 HIDE1A8MVS5 230 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 CYP26A1O43174 497 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 ADAM12O43184 909 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 CCDC172P0C7W6 258 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 KRT5P13647 590 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 FERP16591 822 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 KRT9P35527 623 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 ROR1Q01973 937 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 PTK2Q05397 1052 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 GRIN2CQ14957 1233 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
LSM5-207ENST00000410044 ZNF394Q53GI3 561 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 PLPP4Q5VZY2 271 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 ARHGAP17Q68EM7 881 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 DRC7Q8IY82 874 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 OR8K1Q8NGG5 319 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
LSM5-207ENST00000410044 CPLX3Q8WVH0 158 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 HEXIM2Q96MH2 286 aaKnown RBP16.19■□□□□ 0.18
LSM5-207ENST00000410044 HNRNPABQ99729 332 aaKnown RBP16.19■□□□□ 0.18
LSM5-207ENST00000410044 HSFX1Q9UBD0 423 aa16.19■□□□□ 0.18
LSM5-207ENST00000410044 PTPRDP23468 1912 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.18■□□□□ 0.18
LSM5-207ENST00000410044 WDR27A2RRH5 827 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 LRRC53A6NM62 1247 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 ADH1AP07327 375 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 TPM1P09493 284 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 RPL17P18621 184 aaKnown RBP16.18■□□□□ 0.18
LSM5-207ENST00000410044 USP8P40818 1118 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 PRKCIP41743 596 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 STILQ15468 1287 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 CNGA2Q16280 664 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 SFMBT2Q5VUG0 894 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 PAQR9Q6ZVX9 377 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 ZNF606Q8WXB4 792 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 FUBP3Q96I24 572 aaKnown RBP eCLIP16.18■□□□□ 0.185e-8■■■□□ 17.6
LSM5-207ENST00000410044 DNAJC7Q99615 494 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 PRDM12Q9H4Q4 367 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 TMLHEQ9NVH6 421 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 AFF4Q9UHB7 1163 aaKnown RBP16.18■□□□□ 0.18
LSM5-207ENST00000410044 MYO7AQ13402 2215 aa16.18■□□□□ 0.18
LSM5-207ENST00000410044 AKR1B15C9JRZ8 316 aaPredicted RBP16.17■□□□□ 0.18
LSM5-207ENST00000410044 MFAP3LO75121 409 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 CLASP2O75122 1294 aaKnown RBP16.17■□□□□ 0.18
LSM5-207ENST00000410044 GFPT2O94808 682 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 OR4Q2P0C623 313 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 PNMA6AP0CW24 399 aaPredicted RBP16.17■□□□□ 0.18
LSM5-207ENST00000410044 ATF2P15336 505 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 CYP11B1P15538 503 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 PSMC1P62191 440 aaKnown RBP16.17■□□□□ 0.18
LSM5-207ENST00000410044 MEA1Q16626 185 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 CFAP221Q4G0U5 840 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 SGO2Q562F6 1265 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 RNF19BQ6ZMZ0 732 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 C4orf50Q6ZRC1 276 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 RTL10Q7L3V2 364 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 SLC47A2Q86VL8 602 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 ZNF677Q86XU0 584 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 CNGA4Q8IV77 575 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 C12orf29Q8N999 325 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 TC2NQ8N9U0 490 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 SPPL2BQ8TCT7 592 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 SLC22A17Q8WUG5 538 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 HDAC7Q8WUI4 952 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 TFAP2BQ92481 460 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 DDX1Q92499 740 aaKnown RBP16.17■□□□□ 0.18
LSM5-207ENST00000410044 PCED1BQ96HM7 432 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 CDCA3Q99618 268 aaPredicted RBP16.17■□□□□ 0.18
LSM5-207ENST00000410044 LPIN3Q9BQK8 851 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 ZSWIM1Q9BR11 485 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 B3GNT5Q9BYG0 378 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 PCDHGC5Q9Y5F6 944 aa16.17■□□□□ 0.18
LSM5-207ENST00000410044 BZW2Q9Y6E2 419 aaKnown RBP16.17■□□□□ 0.18
LSM5-207ENST00000410044 MTMR11A4FU01 709 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 O00370 1275 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 VNN2O95498 520 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 CPB1P15086 417 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 KLRC2P26717 231 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 GNA15P30679 374 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 MAGEA11P43364 429 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 CLCN4P51793 760 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 ORC1Q13415 861 aa16.16■□□□□ 0.18
LSM5-207ENST00000410044 KCNC3Q14003 757 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms