RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CYP2F1P24903 491 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 GABRR2P28476 465 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 CLDN10P78369 228 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 NUCB2P80303 420 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 PFKPQ01813 784 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 VEPH1Q14D04 833 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 FAM171BQ6P995 826 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 GPIHBP1Q8IV16 184 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 CCDC105Q8IYK2 499 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 STKLD1Q8NE28 680 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 PARD3BQ8TEW8 1205 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 DDX23Q9BUQ8 820 aaKnown RBP18.98■□□□□ 0.63
LSM5-204ENST00000409909 FOXQ1Q9C009 403 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 ATXN3LQ9H3M9 355 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 SLITRK6Q9H5Y7 841 aa18.98■□□□□ 0.63
LSM5-204ENST00000409909 ZFHX2Q9C0A1 2572 aaPredicted RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 LRRIQ3A6PVS8 624 aaPredicted RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 FGF19O95750 216 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 HMGA1P17096 107 aaKnown RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 WARSP23381 471 aaKnown RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 PCSK1P29120 753 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 MYL6P60660 151 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 MLF2Q15773 248 aaPredicted RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 SDHAF4Q5VUM1 108 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 FMR1NBQ8N0W7 255 aaPredicted RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 DTWD2Q8NBA8 298 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 SHDQ96IW2 340 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 MMS19Q96T76 1030 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 MRPL45Q9BRJ2 306 aaKnown RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 TRMT61BQ9BVS5 477 aaKnown RBP18.97■□□□□ 0.63
LSM5-204ENST00000409909 XYLT2Q9H1B5 865 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 ABCB6Q9NP58 842 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 FAM86C1Q9NVL1 165 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 DLGAP2Q9P1A6 1054 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 MAPK8IP1Q9UQF2 711 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 SIT1Q9Y3P8 196 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 NME7Q9Y5B8 376 aa18.97■□□□□ 0.63
LSM5-204ENST00000409909 SHISA7A6NL88 538 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 LRRN2O75325 713 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 DCNP07585 359 aaKnown RBP18.96■□□□□ 0.63
LSM5-204ENST00000409909 PDGFRBP09619 1106 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 PSMC3P17980 439 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 CD72P21854 359 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 RFX1P22670 979 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 PSMC1P62191 440 aaKnown RBP18.96■□□□□ 0.63
LSM5-204ENST00000409909 DLG4P78352 724 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 CYP4F8P98187 520 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 PRKCQQ04759 706 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 KCNB1Q14721 858 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 DDR2Q16832 855 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 WDR72Q3MJ13 1102 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 GPR158Q5T848 1215 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 TDRD10Q5VZ19 366 aaKnown RBP18.96■□□□□ 0.63
LSM5-204ENST00000409909 TMEM150AQ86TG1 271 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 ALYREFQ86V81 257 aaKnown RBP18.96■□□□□ 0.63
LSM5-204ENST00000409909 ARID3BQ8IVW6 561 aaPredicted RBP18.96■□□□□ 0.63
LSM5-204ENST00000409909 LRRC3BQ96PB8 259 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 CRTAC1Q9NQ79 661 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 TRAF3IP3Q9Y228 551 aa18.96■□□□□ 0.63
LSM5-204ENST00000409909 MTF2Q9Y483 593 aaPredicted RBP18.96■□□□□ 0.63
LSM5-204ENST00000409909 F5P12259 2224 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 KANSL1LA0AUZ9 987 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 HEPACAM2A8MVW5 462 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 STAU1O95793 577 aaKnown RBP18.95■□□□□ 0.62
LSM5-204ENST00000409909 C4BPAP04003 597 aaKnown RBP18.95■□□□□ 0.62
LSM5-204ENST00000409909 GLULP15104 373 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 GDI1P31150 447 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 TRPC3Q13507 836 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 TAF12Q16514 161 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 CFAP221Q4G0U5 840 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 MFSD6LQ8IWD5 586 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 ENGASEQ8NFI3 743 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 PJA1Q8NG27 643 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 ATOH1Q92858 354 aaPredicted RBP18.95■□□□□ 0.62
LSM5-204ENST00000409909 CCDC47Q96A33 483 aaKnown RBP18.95■□□□□ 0.62
LSM5-204ENST00000409909 ELMO3Q96BJ8 720 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 SYT15Q9BQS2 421 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 BRD9Q9H8M2 597 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 HEBP1Q9NRV9 189 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 CDH9Q9ULB4 789 aa18.95■□□□□ 0.62
LSM5-204ENST00000409909 CALUO43852 315 aaPredicted RBP18.94■□□□□ 0.62
LSM5-204ENST00000409909 PHACTR2O75167 634 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 TACC1O75410 805 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 VNN1O95497 513 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 F11P03951 625 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 CDC25CP30307 473 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 GNL1P36915 607 aaPredicted RBP18.94■□□□□ 0.62
LSM5-204ENST00000409909 MRE11P49959 708 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 NLRP12P59046 1061 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 PNOCQ13519 176 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 ARHGAP15Q53QZ3 475 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 C1orf220Q5T0J3 134 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 SPATA2LQ8IUW3 424 aaPredicted RBP18.94■□□□□ 0.62
LSM5-204ENST00000409909 GUF1Q8N442 669 aaKnown RBP18.94■□□□□ 0.62
LSM5-204ENST00000409909 DEPDC1BQ8WUY9 529 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 DNASE1L2Q92874 299 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 FUBP3Q96I24 572 aaKnown RBP eCLIP18.94■□□□□ 0.625e-8■■■□□ 17.6
LSM5-204ENST00000409909 SLC46A2Q9BY10 475 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 IRF2BPLQ9H1B7 796 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 TASP1Q9H6P5 420 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms