RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 ITGB3BPQ13352 177 aaPredicted RBP17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 TFDP3Q5H9I0 405 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 MFSD7Q6UXD7 560 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 TTC39CQ8N584 583 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 SGSM3Q96HU1 749 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 USH1CQ9Y6N9 552 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 ATP8B3O60423 1300 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 CASQ2O14958 399 aaPredicted RBP17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 IL1RL1Q01638 556 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 COPS5Q92905 334 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 SPDL1Q96EA4 605 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 TUBB6Q9BUF5 446 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 CEP41Q9BYV8 373 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
PTPRN2-205ENST00000409483 SNHG28P0DPA3 235 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 ATXN3P54252 364 aaPredicted RBP17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 GNASQ5JWF2 1037 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 PPIL6Q8IXY8 311 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 ARMC2Q8NEN0 867 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 OSMRQ99650 979 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 SLC40A1Q9NP59 571 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 F8VP50 259 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 IGF2BP3O00425 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 PSTPIP1O43586 416 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 CYP2C8P10632 490 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 PTPRAP18433 802 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 GRIK1P39086 918 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 METTL7BQ6UX53 244 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 SPOCD1Q6ZMY3 1216 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 VSIG10LQ86VR7 867 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 PWWP2AQ96N64 755 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 VAV3Q9UKW4 847 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 GOLGA8CPA6NN73 597 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 GJB1P08034 283 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 PRKCIP41743 596 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 PCSK7Q16549 785 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 IL31Q6EBC2 164 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 EP400NLQ6ZTU2 488 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 MIPOL1Q8TD10 442 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 CD248Q9HCU0 757 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 GDF3Q9NR23 364 aa17.23■□□□□ 0.35
PTPRN2-205ENST00000409483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PFDN6O15212 129 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 MYBPC2Q14324 1141 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 KIF19Q2TAC6 998 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 TATDN1Q6P1N9 297 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 RXFP2Q8WXD0 754 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 APOL2Q9BQE5 337 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 SETD4Q9NVD3 440 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PPP1R12AO14974 1030 aaPredicted RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 NCAM1P13591 858 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 CPB1P15086 417 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 ZFXP17010 805 aaPredicted RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 POLE2P56282 527 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PLCB4Q15147 1175 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 RGS9BPQ6ZS82 235 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 ERO1BQ86YB8 467 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 LRRC43Q8N309 656 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 CDC26Q8NHZ8 85 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 ASAP3Q8TDY4 903 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 FAM172AQ8WUF8 416 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 GRAMD1AQ96CP6 724 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PABPC5Q96DU9 382 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 CTNNAL1Q9UBT7 734 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 LOC100653049A0A140TA62 436 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 KRT34O76011 436 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 ACO1P21399 889 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PTPN11Q06124 597 aaPredicted RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 GJC2Q5T442 439 aaPredicted RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 HGSNATQ68CP4 663 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 KLC3Q6P597 504 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 TMEM161BQ8NDZ6 487 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 ALKBH8Q96BT7 664 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PAK5Q9P286 719 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 EEF2KO00418 725 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 NOL4O94818 638 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 SHBGP04278 402 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PRAMEP78395 509 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 APTXQ7Z2E3 356 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 PALB2Q86YC2 1186 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 SLC26A7Q8TE54 656 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 MAP3K20Q9NYL2 800 aaKnown RBP17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 DNPEPQ9ULA0 475 aa17.22■□□□□ 0.35
PTPRN2-205ENST00000409483 UBA6A0AVT1 1052 aaPredicted RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 ZC3H11AO75152 810 aaKnown RBP eCLIP17.21■□□□□ 0.351e-6■■■□□ 15
PTPRN2-205ENST00000409483 DGKDQ16760 1214 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 ALG3Q92685 438 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 EPAS1Q99814 870 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 ATP5HO75947 161 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 TTC4O95801 387 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 YY1P25490 414 aa17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 HNRNPH1P31943 449 aaKnown RBP17.21■□□□□ 0.35
PTPRN2-205ENST00000409483 MOB2Q70IA6 237 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms