RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CMA1P23946 247 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 CYP24A1Q07973 514 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 MYO1EQ12965 1108 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 INTS6LQ5JSJ4 861 aaKnown RBP20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 SDHAF4Q5VUM1 108 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 HS2ST1Q7LGA3 356 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 TRAPPC11Q7Z392 1133 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 XXYLT1Q8NBI6 393 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 DEPDC1BQ8WUY9 529 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 IRF7Q92985 503 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 GZF1Q9H116 711 aaPredicted RBP20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 GTF3C4Q9UKN8 822 aa20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 R3HCC1Q9Y3T6 440 aaKnown RBP20.71■□□□□ 0.91
SMARCB1-204ENST00000407422 ZNF638Q14966 1978 aaKnown RBP20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 GABRDO14764 452 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 PRPF40AO75400 957 aaKnown RBP20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 FGF19O95750 216 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 CYP2F1P24903 491 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 MYL7Q01449 175 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 STK4Q13043 487 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 TAF12Q16514 161 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 NFE2Q16621 373 aaPredicted RBP20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 KNOP1Q1ED39 458 aaKnown RBP20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 ZNF852Q6ZMS4 543 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 LIMS2Q7Z4I7 341 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 OSBPL6Q9BZF3 934 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 HPSEQ9Y251 543 aa20.7■□□□□ 0.9
SMARCB1-204ENST00000407422 PRR23AA6NEV1 266 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 ARNTLO00327 626 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 ZNF263O14978 683 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 CST3P01034 146 aaPredicted RBP20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 HMGA1P17096 107 aaKnown RBP20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 TNNI1P19237 187 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 SNRPFP62306 86 aaKnown RBP20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 KRT85P78386 507 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 PSMD6Q15008 389 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 TMEM150AQ86TG1 271 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 MAML2Q8IZL2 1156 aaPredicted RBP20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 KIAA0895Q8NCT3 520 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 KBTBD7Q8WVZ9 684 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 E2F7Q96AV8 911 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 BCO2Q9BYV7 579 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 FANCMQ8IYD8 2048 aa20.69■□□□□ 0.9
SMARCB1-204ENST00000407422 MYBPHLA2RUH7 354 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 ATP2C2O75185 946 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 PRAMEF12O95522 483 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 LMO2P25791 158 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 CDC25CP30307 473 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 LHX1P48742 406 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 FZD5Q13467 585 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 DDR2Q16832 855 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 KMT5BQ4FZB7 885 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 ARHGAP15Q53QZ3 475 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 C12orf56Q8IXR9 622 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 ZNF516Q92618 1163 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 FNBP1Q96RU3 617 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 CGRRF1Q99675 332 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 SMG9Q9H0W8 520 aaKnown RBP20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 TASP1Q9H6P5 420 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 TRPV5Q9NQA5 729 aa20.68■□□□□ 0.9
SMARCB1-204ENST00000407422 FCHO2Q0JRZ9 810 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 DPH6Q7L8W6 267 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 YAF2Q8IY57 180 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 ZNF687Q8N1G0 1237 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 SPATA18Q8TC71 538 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 NKD2Q969F2 451 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 CLDN23Q96B33 292 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 NELL2Q99435 816 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 SLC46A2Q9BY10 475 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 EXOC1Q9NV70 894 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 SPATA6Q9NWH7 488 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 NDRG2Q9UN36 371 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 MAGED2Q9UNF1 606 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 PIAS3Q9Y6X2 628 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 R4GN57 208 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 ZNF292O60281 2723 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 EP300Q09472 2414 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 KIF26AQ9ULI4 1882 aaPredicted RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 GVINP1Q7Z2Y8 2422 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 EXOC3O60645 756 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 SP9P0CG40 484 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 PCSK1P29120 753 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 CASP4P49662 377 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 NDUFA8P51970 172 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 NLRP12P59046 1061 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 PSMC1P62191 440 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 PLEKHO2Q8TD55 490 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 ZFYVE19Q96K21 471 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 GCNAQ96QF7 691 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 MMS19Q96T76 1030 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 ABCB6Q9NP58 842 aa20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 CGNQ9P2M7 1197 aaKnown RBP20.67■□□□□ 0.9
SMARCB1-204ENST00000407422 PTPRDP23468 1912 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 GREB1Q4ZG55 1949 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 F11P03951 625 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 PDGFRBP09619 1106 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 FAM171BQ6P995 826 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 SYT15Q9BQS2 421 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 USP25Q9UHP3 1055 aa20.66■□□□□ 0.9
SMARCB1-204ENST00000407422 MRPS17Q9Y2R5 130 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms