RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 STK39Q9UEW8 545 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 PUF60Q9UHX1 559 aaKnown RBP23.37■■□□□ 1.33
EPCAM-202ENST00000405271 CDH9Q9ULB4 789 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 PCDHB12Q9Y5F1 795 aa23.37■■□□□ 1.33
EPCAM-202ENST00000405271 EPN1Q9Y6I3 576 aaPredicted RBP23.37■■□□□ 1.33
EPCAM-202ENST00000405271 ATG2AQ2TAZ0 1938 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 EIF3CLB5ME19 914 aaKnown RBP23.36■■□□□ 1.33
EPCAM-202ENST00000405271 IPO7O95373 1038 aaKnown RBP23.36■■□□□ 1.33
EPCAM-202ENST00000405271 LINC00271P0C7V0 271 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 TKTP29401 623 aaKnown RBP23.36■■□□□ 1.33
EPCAM-202ENST00000405271 FMO1Q01740 532 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 ORC1Q13415 861 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 MTF1Q14872 753 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 SGO2Q562F6 1265 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 FAM171A1Q5VUB5 890 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 TRIM72Q6ZMU5 477 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 ACOT1Q86TX2 421 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 OLIG1Q8TAK6 271 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 EIF3CQ99613 913 aaKnown RBP23.36■■□□□ 1.33
EPCAM-202ENST00000405271 PCDHGC3Q9UN70 934 aa23.36■■□□□ 1.33
EPCAM-202ENST00000405271 OAZ2O95190 189 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 LCA5LO95447 670 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 MMEP08473 750 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 CHRNB2P17787 502 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 BRD2P25440 801 aaKnown RBP23.35■■□□□ 1.33
EPCAM-202ENST00000405271 LMO2P25791 158 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 ERVK-21P61565 698 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 TAF3Q5VWG9 929 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 B3GALNT2Q8NCR0 500 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 LNX1Q8TBB1 728 aaPredicted RBP23.35■■□□□ 1.33
EPCAM-202ENST00000405271 HEXIM2Q96MH2 286 aaKnown RBP23.35■■□□□ 1.33
EPCAM-202ENST00000405271 TGS1Q96RS0 853 aaKnown RBP23.35■■□□□ 1.33
EPCAM-202ENST00000405271 SYT15Q9BQS2 421 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 ACBD6Q9BR61 282 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.35■■□□□ 1.33
EPCAM-202ENST00000405271 DPEP3Q9H4B8 488 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 ADAMTS1Q9UHI8 967 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 MTUS1Q9ULD2 1270 aa23.35■■□□□ 1.33
EPCAM-202ENST00000405271 PDGFRBP09619 1106 aa23.34■■□□□ 1.33
EPCAM-202ENST00000405271 VARS2Q5ST30 1063 aaKnown RBP23.34■■□□□ 1.33
EPCAM-202ENST00000405271 GLYCTKQ8IVS8 523 aa23.34■■□□□ 1.33
EPCAM-202ENST00000405271 SLC30A5Q8TAD4 765 aa23.34■■□□□ 1.33
EPCAM-202ENST00000405271 TFAP2BQ92481 460 aa23.34■■□□□ 1.33
EPCAM-202ENST00000405271 HERC2P3Q9BVR0 1158 aa23.34■■□□□ 1.33
EPCAM-202ENST00000405271 OXCT2Q9BYC2 517 aaPredicted RBP23.34■■□□□ 1.33
EPCAM-202ENST00000405271 SEPT11Q9NVA2 429 aaKnown RBP23.34■■□□□ 1.33
EPCAM-202ENST00000405271 ZKSCAN5Q9Y2L8 839 aa23.34■■□□□ 1.33
EPCAM-202ENST00000405271 MYO16Q9Y6X6 1858 aa23.34■■□□□ 1.33
EPCAM-202ENST00000405271 A0A087X0T9 212 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 DDX3XO00571 662 aaKnown RBP eCLIP23.33■■□□□ 1.332e-24■■■■■ 39.9
EPCAM-202ENST00000405271 HCRTO43612 131 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 CALCAP01258 141 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 FAM228BP0C875 321 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 SPA17Q15506 151 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 ARHGAP17Q68EM7 881 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 ZNF280DQ6N043 979 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 RTP3Q9BQQ7 232 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 TTPALQ9BTX7 342 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 PDCL3Q9H2J4 239 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 SPTLC3Q9NUV7 552 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.33■■□□□ 1.33
EPCAM-202ENST00000405271 ATP8B3O60423 1300 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 MTCL1Q9Y4B5 1905 aaKnown RBP23.33■■□□□ 1.33
EPCAM-202ENST00000405271 VCANP13611 3396 aa23.33■■□□□ 1.33
EPCAM-202ENST00000405271 O00370 1275 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 SOD2P04179 222 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 ACAT1P24752 427 aaKnown RBP23.33■■□□□ 1.32
EPCAM-202ENST00000405271 TSPY1Q01534 308 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 GFPT1Q06210 699 aaPredicted RBP23.33■■□□□ 1.32
EPCAM-202ENST00000405271 MRPL58Q14197 206 aaKnown RBP23.33■■□□□ 1.32
EPCAM-202ENST00000405271 CNGA2Q16280 664 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 USP41Q3LFD5 358 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 INTS6LQ5JSJ4 861 aaKnown RBP23.33■■□□□ 1.32
EPCAM-202ENST00000405271 PPP1R2P3Q6NXS1 205 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 DDX53Q86TM3 631 aaKnown RBP23.33■■□□□ 1.32
EPCAM-202ENST00000405271 ZSWIM1Q9BR11 485 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 C17orf80Q9BSJ5 609 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 LUC7LQ9NQ29 371 aaKnown RBP23.33■■□□□ 1.32
EPCAM-202ENST00000405271 NAGPAQ9UK23 515 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 NENFQ9UMX5 172 aa23.33■■□□□ 1.32
EPCAM-202ENST00000405271 GREB1Q4ZG55 1949 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 REV3LO60673 3130 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 H7C4K7 107 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 LPXNO60711 386 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 LSM8O95777 96 aaKnown RBP23.32■■□□□ 1.32
EPCAM-202ENST00000405271 PTPN1P18031 435 aaKnown RBP23.32■■□□□ 1.32
EPCAM-202ENST00000405271 POU3F3P20264 500 aaPredicted RBP23.32■■□□□ 1.32
EPCAM-202ENST00000405271 PSMC1P62191 440 aaKnown RBP23.32■■□□□ 1.32
EPCAM-202ENST00000405271 KRT83P78385 493 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 C10orf76Q5T2E6 689 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 TOGARAM2Q6ZUX3 1019 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 ANKS3Q6ZW76 656 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 CEP57Q86XR8 500 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 VN1R3Q9BXE9 311 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 PYCARDQ9ULZ3 195 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 CEP83Q9Y592 693 aa23.32■■□□□ 1.32
EPCAM-202ENST00000405271 COL4A4P53420 1690 aaPredicted RBP23.31■■□□□ 1.32
EPCAM-202ENST00000405271 OR6C75A6NL08 312 aa23.31■■□□□ 1.32
EPCAM-202ENST00000405271 CCDC175P0C221 793 aa23.31■■□□□ 1.32
EPCAM-202ENST00000405271 GZMAP12544 262 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms