RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TMEM108Q6UXF1 575 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 LRRC55Q6ZSA7 311 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 BEND5Q7L4P6 421 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 CPT1CQ8TCG5 803 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 TMEM125Q96AQ2 219 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 ADOQ96SZ5 270 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 PNKPQ96T60 521 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 HERPUD2Q9BSE4 406 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 STK33Q9BYT3 514 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 REXO4Q9GZR2 422 aaKnown RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 LRFN1Q9P244 771 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 IGSF9Q9P2J2 1179 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 CLCA2Q9UQC9 943 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 MTO1Q9Y2Z2 717 aaKnown RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 CHST2Q9Y4C5 530 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 RAD54BQ9Y620 910 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 A0A0G2JLL6 359 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 GRXCR1A8MXD5 290 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 PIP5K1BO14986 540 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 FFAR2O15552 330 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 RASAL1O95294 804 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 GPANK1O95872 356 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 LMNAP02545 664 aaKnown RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 CSTBP04080 98 aaKnown RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 PAX3P23760 479 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 YY1P25490 414 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 GABRB3P28472 473 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 VIPR2P41587 438 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 ICA1Q05084 483 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 PIGFQ07326 219 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 TCF15Q12870 199 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 BLMHQ13867 455 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 CNGB1Q14028 1251 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 SLC29A2Q14542 456 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 PFKFB4Q16877 469 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 GEN1Q17RS7 908 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 RAP1GAP2Q684P5 730 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 FCRL6Q6DN72 434 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 PGBD2Q6P3X8 592 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 CATSPERGQ6ZRH7 1159 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 MAPKAPK5Q8IW41 473 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 YAF2Q8IY57 180 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 NKAPQ8N5F7 415 aaKnown RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 VGLL2Q8N8G2 317 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 Q8NA96 180 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 FANCBQ8NB91 859 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 STYXQ8WUJ0 223 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 CCT6BQ92526 530 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 PPP1R9BQ96SB3 815 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 RBM15Q96T37 977 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 GDF15Q99988 308 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 MESP1Q9BRJ9 268 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 BDH2Q9BUT1 245 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 SORBS1Q9BX66 1292 aaKnown RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 SIK2Q9H0K1 926 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 RNPEPQ9H4A4 650 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 SCAF8Q9UPN6 1271 aaKnown RBP4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 XDHP47989 1333 aa4.64□□□□□ -1.67
HMGB1P17-201ENST00000403495 LOC102723971A0A1B0GUV8 181 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 hCG_1642624A0A1W2PR95 340 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 GOLGA6L6A8MZA4 724 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 RRP9O43818 475 aaKnown RBP4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 NCR1O76036 304 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 TYRP1P17643 537 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 TPH1P17752 444 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 PPM1FP49593 454 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 CPT1AP50416 773 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 SP2Q02086 613 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 ARHGEF7Q14155 803 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 NPY5RQ15761 445 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 RAB30Q15771 203 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 METTL24Q5JXM2 366 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZFYVE27Q5T4F4 411 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 ARHGAP40Q5TG30 622 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 VPS53Q5VIR6 699 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 B3GNTL1Q67FW5 361 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 NAIF1Q69YI7 327 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 PLAG1Q6DJT9 500 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 LAYNQ6UX15 382 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 LDHAL6AQ6ZMR3 332 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 GDF7Q7Z4P5 450 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 SUGP1Q8IWZ8 645 aaKnown RBP4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 POC1BQ8TC44 478 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 BPIFB1Q8TDL5 484 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 NACC2Q96BF6 587 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 RNF31Q96EP0 1072 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 LOXL4Q96JB6 756 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZC3H10Q96K80 434 aaKnown RBP4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 SCLT1Q96NL6 688 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 MAGEB5Q9BZ81 275 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 MAGEH1Q9H213 219 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 CXorf36Q9H7Y0 433 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 CD248Q9HCU0 757 aa4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 HEYLQ9NQ87 328 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P17-201ENST00000403495 RGL1Q9NZL6 768 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms