RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PAX3P23760 479 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 KIF5AQ12840 1032 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 H2AFVQ71UI9 128 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 HERC6Q8IVU3 1022 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 CRYBG2Q8N1P7 616 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 C16orf45Q96MC5 204 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-204ENST00000397443 ZNF558Q96NG5 402 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 CHORDC1Q9UHD1 332 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-204ENST00000397443 ARHGEF37A1IGU5 675 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 MACROD2A1Z1Q3 448 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 RTN2O75298 545 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 CYP1A1P04798 512 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-204ENST00000397443 UNGP13051 313 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-204ENST00000397443 ARHGAP25P42331 645 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 NSFP46459 744 aaKnown RBP22.48■■□□□ 1.19
CPNE1-204ENST00000397443 NOMO3P69849 1222 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 CNGA2Q16280 664 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 TAS1R1Q7RTX1 841 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 PHLDB2Q86SQ0 1253 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 SLC2A14Q8TDB8 520 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 TMEM209Q96SK2 561 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 CRTAC1Q9NQ79 661 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 KIAA1257Q9ULG3 409 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 PCDHGC3Q9UN70 934 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 CEP83Q9Y592 693 aa22.48■■□□□ 1.19
CPNE1-204ENST00000397443 VWA8A3KMH1 1905 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 MYBPHLA2RUH7 354 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 CLDN5O00501 218 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 ATMINO43313 823 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-204ENST00000397443 TLL1O43897 1013 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 TYMPP19971 482 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 PCSK1P29120 753 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 C10orf76Q5T2E6 689 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 ACAD10Q6JQN1 1059 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 TRIM72Q6ZMU5 477 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 THEM5Q8N1Q8 247 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 OR10T2Q8NGX3 314 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 IRX2Q9BZI1 471 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-204ENST00000397443 DNAI2Q9GZS0 605 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 THAP2Q9H0W7 228 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 MTIF3Q9H2K0 278 aaKnown RBP22.47■■□□□ 1.19
CPNE1-204ENST00000397443 KCND1Q9NSA2 647 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 GTF3C4Q9UKN8 822 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 PAXBP1Q9Y5B6 917 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 FAM163BP0C2L3 166 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 GZMAP12544 262 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 VARS2Q5ST30 1063 aaKnown RBP22.47■■□□□ 1.19
CPNE1-204ENST00000397443 COLGALT1Q8NBJ5 622 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 IGSF21Q96ID5 467 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 SLC9A7Q96T83 725 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 C11orf70Q9BRQ4 267 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 MED10Q9BTT4 135 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 ISCUQ9H1K1 167 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 INSL6Q9Y581 213 aa22.47■■□□□ 1.19
CPNE1-204ENST00000397443 RABGGTBP53611 331 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 HTRA4P83105 476 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-204ENST00000397443 LCLAT1Q6UWP7 414 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 FIBCD1Q8N539 461 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 WDTC1Q8N5D0 677 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 TMEM35BQ8NCS4 154 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 CTNNBL1Q8WYA6 563 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-204ENST00000397443 HESX1Q9UBX0 185 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 CYTH4Q9UIA0 394 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 CDH9Q9ULB4 789 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 MYH10P35580 1976 aa22.46■■□□□ 1.19
CPNE1-204ENST00000397443 LCHNA4D1U4 455 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 SYN3O14994 580 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 KRT86O43790 486 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 OR4Q2P0C623 313 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 LAG3P18627 525 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 NAP1L1P55209 391 aaKnown RBP22.45■■□□□ 1.18
CPNE1-204ENST00000397443 CENPCQ03188 943 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 RTP2Q5QGT7 225 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 MMS22LQ6ZRQ5 1243 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 TTC30AQ86WT1 665 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 SECISBP2LQ93073 1101 aaKnown RBP22.45■■□□□ 1.18
CPNE1-204ENST00000397443 TMEM169Q96HH4 297 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 RNPC3Q96LT9 517 aaKnown RBP22.45■■□□□ 1.18
CPNE1-204ENST00000397443 MYO1AQ9UBC5 1043 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 GRXCR1A8MXD5 290 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 BUB1O43683 1085 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 LSM8O95777 96 aaKnown RBP22.45■■□□□ 1.18
CPNE1-204ENST00000397443 LLGL2Q6P1M3 1020 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 ZNF653Q96CK0 615 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 ARHGEF26Q96DR7 871 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 RAD9AQ99638 391 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 ACBD6Q9BR61 282 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 VN1R3Q9BXE9 311 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 ST7Q9NRC1 585 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 SALL4Q9UJQ4 1053 aa22.45■■□□□ 1.18
CPNE1-204ENST00000397443 LAMA3Q16787 3333 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 ANKRD62A6NC57 917 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 GOLGA6L9A6NEM1 432 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 PIK3R2O00459 728 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 C2CD2LO14523 706 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 ZNF500O60304 480 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-204ENST00000397443 FGFR3P22607 806 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 TSPY1Q01534 308 aa22.44■■□□□ 1.18
CPNE1-204ENST00000397443 ELAVL2Q12926 359 aaKnown RBP22.44■■□□□ 1.18
CPNE1-204ENST00000397443 SHHQ15465 462 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms