RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 SV2CQ496J9 727 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
SYNE4-203ENST00000397428 TXNDC8Q6A555 127 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 CAMKK1Q8N5S9 505 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 KRI1Q8N9T8 703 aaKnown RBP12.86□□□□□ -0.35
SYNE4-203ENST00000397428 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 LEO1Q8WVC0 666 aaPredicted RBP12.86□□□□□ -0.35
SYNE4-203ENST00000397428 LARP4BQ92615 738 aaKnown RBP12.86□□□□□ -0.35
SYNE4-203ENST00000397428 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 PKMYT1Q99640 499 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 ACBD6Q9BR61 282 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 EBF3Q9H4W6 596 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 ABI2Q9NYB9 513 aaPredicted RBP12.86□□□□□ -0.35
SYNE4-203ENST00000397428 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 TBCAO75347 108 aaKnown RBP12.85□□□□□ -0.35
SYNE4-203ENST00000397428 RPP40O75818 363 aaKnown RBP12.85□□□□□ -0.35
SYNE4-203ENST00000397428 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
SYNE4-203ENST00000397428 CSH1P0DML2 217 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 CSH2P0DML3 217 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 PNPLA4P41247 253 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 WNT7BP56706 349 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 AMPD2Q01433 879 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 KCNA1Q09470 495 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 PDGFRLQ15198 375 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
SYNE4-203ENST00000397428 PLA2G2CQ5R387 149 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 SCARA3Q6AZY7 606 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 TRIM68Q6AZZ1 485 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 KBTBD6Q86V97 674 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 PDCL2Q8N4E4 241 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 RIN3Q8TB24 985 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 POMGNT1Q8WZA1 660 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
SYNE4-203ENST00000397428 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 ARRDC1-AS1Q9H2J1 176 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 KIF9Q9HAQ2 790 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 ABCB6Q9NP58 842 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 GDAP2Q9NXN4 497 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 SLC8A2Q9UPR5 921 aa12.85□□□□□ -0.35
SYNE4-203ENST00000397428 LAMA1P25391 3075 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
SYNE4-203ENST00000397428 NOL4O94818 638 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 EPN2O95208 641 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 EGFP01133 1207 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 ARSAP15289 507 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 DRD1P21728 446 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 CYP2F1P24903 491 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 PXNP49023 591 aaPredicted RBP12.84□□□□□ -0.35
SYNE4-203ENST00000397428 GPR15P49685 360 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
SYNE4-203ENST00000397428 BFSP1Q12934 665 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 SF3A2Q15428 464 aaKnown RBP12.84□□□□□ -0.35
SYNE4-203ENST00000397428 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
SYNE4-203ENST00000397428 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 C1orf127Q8N9H9 656 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 ZSWIM2Q8NEG5 633 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 CACTINQ8WUQ7 758 aaKnown RBP12.84□□□□□ -0.35
SYNE4-203ENST00000397428 MRPS31Q92665 395 aaKnown RBP12.84□□□□□ -0.35
SYNE4-203ENST00000397428 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 CYP2S1Q96SQ9 504 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 FAM213AQ9BRX8 229 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 RXFP3Q9NSD7 469 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 SEL1LQ9UBV2 794 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 AGAP1Q9UPQ3 857 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 PCDHGA5Q9Y5G8 931 aa12.84□□□□□ -0.35
SYNE4-203ENST00000397428 MYMKA6NI61 221 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 GABRDO14764 452 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 GJA4P35212 333 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 TSPY1Q01534 308 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 DDR2Q16832 855 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 FBXO43Q4G163 708 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
SYNE4-203ENST00000397428 FAM171BQ6P995 826 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 LIMS2Q7Z4I7 341 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 TMEM86AQ8N2M4 240 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 LRRC52Q8N7C0 313 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 SPATA18Q8TC71 538 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 EZH1Q92800 747 aaPredicted RBP12.83□□□□□ -0.36
SYNE4-203ENST00000397428 ZNF560Q96MR9 790 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 P2RY13Q9BPV8 354 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
SYNE4-203ENST00000397428 DDX43Q9NXZ2 648 aaKnown RBP12.83□□□□□ -0.36
SYNE4-203ENST00000397428 UXTQ9UBK9 157 aaPredicted RBP12.83□□□□□ -0.36
SYNE4-203ENST00000397428 STK17AQ9UEE5 414 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 EBF1Q9UH73 591 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 GTF3C4Q9UKN8 822 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 EXOC7Q9UPT5 735 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 TCHHQ07283 1943 aa12.83□□□□□ -0.36
SYNE4-203ENST00000397428 GREB1Q4ZG55 1949 aa12.82□□□□□ -0.36
SYNE4-203ENST00000397428 HUS1O60921 280 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms