RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 IGFBP6P24592 240 aaPredicted RBP18.52■□□□□ 0.56
MBD4-202ENST00000393278 CTNNA2P26232 953 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 SLC1A1P43005 524 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 MNX1P50219 401 aaPredicted RBP18.52■□□□□ 0.56
MBD4-202ENST00000393278 PDCLQ13371 301 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 GPNMBQ14956 572 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 UPP1Q16831 310 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 GOLGA7BQ2TAP0 167 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 PPP1R15BQ5SWA1 713 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 DCAF12L1Q5VU92 463 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 ARHGAP17Q68EM7 881 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 CPNE8Q86YQ8 564 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 ALG3Q92685 438 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 KRT35Q92764 455 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 DNAI2Q9GZS0 605 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 EPC1Q9H2F5 836 aa18.52■□□□□ 0.56
MBD4-202ENST00000393278 CCDC66A2RUB6 948 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 HCRTO43612 131 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 PQBP1O60828 265 aaKnown RBP18.51■□□□□ 0.55
MBD4-202ENST00000393278 PROSCO94903 275 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 LMO2P25791 158 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 CTNNA1P35221 906 aaKnown RBP18.51■□□□□ 0.55
MBD4-202ENST00000393278 TAP1Q03518 808 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 PKDCCQ504Y2 493 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 CYP4A22Q5TCH4 519 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 OSTM1Q86WC4 334 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 MMGT1Q8N4V1 131 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 C3orf58Q8NDZ4 430 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 UBA3Q8TBC4 463 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 C18orf8Q96DM3 657 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 DDX27Q96GQ7 796 aaKnown RBP18.51■□□□□ 0.55
MBD4-202ENST00000393278 SENP8Q96LD8 212 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 ANKZF1Q9H8Y5 726 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 FAM49BQ9NUQ9 324 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 WDR35Q9P2L0 1181 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 TJP2Q9UDY2 1190 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 TTC7AQ9ULT0 858 aaPredicted RBP18.51■□□□□ 0.55
MBD4-202ENST00000393278 INPP5FQ9Y2H2 1132 aa18.51■□□□□ 0.55
MBD4-202ENST00000393278 TMEM191CA6NGB0 347 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 PGRMC1O00264 195 aaKnown RBP18.5■□□□□ 0.55
MBD4-202ENST00000393278 GJB6O95452 261 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 PFKMP08237 780 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 PDGFRBP09619 1106 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 GABRB2P47870 512 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 AARSP49588 968 aaKnown RBP eCLIP18.5■□□□□ 0.55
MBD4-202ENST00000393278 PEX5P50542 639 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 TUSC3Q13454 348 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 PLEKHG4Q58EX7 1191 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 ANKRD33Q7Z3H0 272 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.5■□□□□ 0.558e-7■■■□□ 16.1
MBD4-202ENST00000393278 LCMT1Q9UIC8 334 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 PCDHA3Q9Y5H8 950 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 GABRDO14764 452 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 ERBB2P04626 1255 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 SETSIPP0DME0 302 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 MAN1A1P33908 653 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 MARCKSL1P49006 195 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 RNASE9P60153 205 aaKnown RBP18.5■□□□□ 0.55
MBD4-202ENST00000393278 RPL7AP62424 266 aaKnown RBP18.5■□□□□ 0.55
MBD4-202ENST00000393278 ZNF268Q14587 947 aaPredicted RBP18.5■□□□□ 0.55
MBD4-202ENST00000393278 WSCD1Q658N2 575 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 SLC39A5Q6ZMH5 540 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 FAM43BQ6ZT52 329 aaPredicted RBP18.5■□□□□ 0.55
MBD4-202ENST00000393278 CTU1Q7Z7A3 348 aaKnown RBP18.5■□□□□ 0.55
MBD4-202ENST00000393278 TTC30AQ86WT1 665 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 XYLT1Q86Y38 959 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 ZNF333Q96JL9 665 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 TNIP3Q96KP6 325 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 UROC1Q96N76 676 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 PAAF1Q9BRP4 392 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 SYNCQ9H7C4 482 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 RBM12Q9NTZ6 932 aaKnown RBP18.5■□□□□ 0.55
MBD4-202ENST00000393278 HESX1Q9UBX0 185 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 IP6K2Q9UHH9 426 aa18.5■□□□□ 0.55
MBD4-202ENST00000393278 TDRD15B5MCY1 1934 aaKnown RBP18.49■□□□□ 0.55
MBD4-202ENST00000393278 RHOXF2BP0C7M4 288 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 ATN1P54259 1190 aaPredicted RBP18.49■□□□□ 0.55
MBD4-202ENST00000393278 PSMC1P62191 440 aaKnown RBP18.49■□□□□ 0.55
MBD4-202ENST00000393278 DCUN1D2Q6PH85 259 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 FBXO46Q6PJ61 603 aaPredicted RBP18.49■□□□□ 0.55
MBD4-202ENST00000393278 GLB1LQ6UWU2 654 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 TMEM86AQ8N2M4 240 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 DBF4BQ8NFT6 615 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.49■□□□□ 0.55
MBD4-202ENST00000393278 IPO4Q8TEX9 1081 aaKnown RBP18.49■□□□□ 0.55
MBD4-202ENST00000393278 MCEEQ96PE7 176 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 LPIN3Q9BQK8 851 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 RHOXF2Q9BQY4 288 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 TMEM59LQ9UK28 342 aa18.49■□□□□ 0.55
MBD4-202ENST00000393278 SIGLEC16A6NMB1 481 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 COL6A1P12109 1028 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 H2AFXP16104 143 aaPredicted RBP18.48■□□□□ 0.55
MBD4-202ENST00000393278 PAX3P23760 479 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 CLLU1OSQ5K130 101 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 DSTYKQ6XUX3 929 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 DNAJC5GQ8N7S2 189 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 MCRS1Q96EZ8 462 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 RNPC3Q96LT9 517 aaKnown RBP18.48■□□□□ 0.55
MBD4-202ENST00000393278 PARD6BQ9BYG5 372 aa18.48■□□□□ 0.55
MBD4-202ENST00000393278 MIS12Q9H081 205 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms