RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 SLC13A1Q9BZW2 595 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 ZC3H7BQ9UGR2 993 aaKnown RBP10.74□□□□□ -0.69
PKP4-201ENST00000389757 TPX2Q9ULW0 747 aaKnown RBP10.74□□□□□ -0.69
PKP4-201ENST00000389757 ZNF541Q9H0D2 1346 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.74□□□□□ -0.69
PKP4-201ENST00000389757 A0A0G2JND7 137 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 ESRRAP11474 423 aaPredicted RBP10.74□□□□□ -0.69
PKP4-201ENST00000389757 BRAFP15056 766 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 MAP3K7CLP57077 242 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 SESN3P58005 492 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 EARS2Q5JPH6 523 aaKnown RBP10.74□□□□□ -0.69
PKP4-201ENST00000389757 RAD9BQ6WBX8 426 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 PNMA5Q96PV4 448 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 PCDHB5Q9Y5E4 795 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 MAPK13O15264 365 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 ITIH2P19823 946 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 STAT4Q14765 748 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 PRAMEF19Q5SWL8 479 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 FBXO38Q6PIJ6 1188 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 C4orf22Q6V702 233 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 SLC25A41Q8N5S1 370 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 TBC1D19Q8N5T2 526 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 PTPRN2Q92932 1015 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 CAMKK2Q96RR4 588 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 SERPINI1Q99574 410 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 ARHGEF38Q9NXL2 777 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 XPO7Q9UIA9 1087 aaKnown RBP10.74□□□□□ -0.69
PKP4-201ENST00000389757 MYO5BQ9ULV0 1848 aa10.74□□□□□ -0.69
PKP4-201ENST00000389757 TMEM150BA6NC51 233 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 PIK3CDO00329 1044 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 EML1O00423 815 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 PGK1P00558 417 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 BST2Q10589 180 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 EFEMP1Q12805 493 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 SFSWAPQ12872 951 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 PDAP1Q13442 181 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 POLD3Q15054 466 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 FSCBQ5H9T9 825 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 FAM171A1Q5VUB5 890 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 ZNF507Q8TCN5 953 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 GIPC2Q8TF65 315 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 COPS5Q92905 334 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 TSPAN17Q96FV3 270 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 INTS13Q9NVM9 706 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 ORC6Q9Y5N6 252 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 TLR2O60603 784 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 IFNA8P32881 189 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 TATDN1Q6P1N9 297 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 NT5DC4Q86YG4 428 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 PDZD8Q8NEN9 1154 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 MS4A14Q96JA4 679 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 EMILIN2Q9BXX0 1053 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 IRX2Q9BZI1 471 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 THAP2Q9H0W7 228 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 PPARGC1AQ9UBK2 798 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 PLAGL2Q9UPG8 496 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 SLC12A8A0AV02 714 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 CCDC78A2IDD5 438 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 SMAPO00193 183 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 SETSIPP0DME0 302 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 MYL4P12829 197 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 KLRC2P26717 231 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 NUDCD3Q8IVD9 361 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 CALML6Q8TD86 181 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 KLHL29Q96CT2 875 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 ADAM2Q99965 735 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 SPDYE5A6NIY4 337 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 LSM8O95777 96 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 GFAPP14136 432 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 MAGOHP61326 146 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 PLD1Q13393 1074 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 NAPEPLDQ6IQ20 393 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 MFN1Q8IWA4 741 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 CCDC60Q8IWA6 550 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 USP13Q92995 863 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 RBM15Q96T37 977 aaKnown RBP eCLIP10.73□□□□□ -0.693e-7■■■■□ 21.1
PKP4-201ENST00000389757 SYNDIG1Q9H7V2 258 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 CHORDC1Q9UHD1 332 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 FBXL5Q9UKA1 691 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 IPPQ9Y573 584 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 TIMM13Q9Y5L4 95 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 A0A1B0GUA9 196 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 CARNS1A5YM72 827 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 ANP32DO95626 131 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 SYF2O95926 243 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 ASS1P00966 412 aaKnown RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 CCZ1BP86790 482 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 CCZ1P86791 482 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 CENPCQ03188 943 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 REM2Q8IYK8 340 aaPredicted RBP10.73□□□□□ -0.69
PKP4-201ENST00000389757 LATS2Q9NRM7 1088 aa10.73□□□□□ -0.69
PKP4-201ENST00000389757 NFASCO94856 1347 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 CCDC195A0A1B0GUA6 201 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 ZNF263O14978 683 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 KPNA1P52294 538 aaPredicted RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 RBBP7Q16576 425 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 FAM47EQ6ZV65 393 aa10.72□□□□□ -0.69
PKP4-201ENST00000389757 ZNF467Q7Z7K2 595 aaPredicted RBP10.72□□□□□ -0.69
PKP4-201ENST00000389757 TFB1MQ8WVM0 346 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms