RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CDC25CP30307 473 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ATP11AP98196 1134 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 STAT4Q14765 748 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 LLGL1Q15334 1064 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TARBP2Q15633 366 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 RASGRP2Q7LDG7 609 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 KIAA0319LQ8IZA0 1049 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 DCLK2Q8N568 766 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 DEFB119Q8N690 84 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 PPTC7Q8NI37 304 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TMA16Q96EY4 203 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 COG5Q9UP83 839 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 INVSQ9Y283 1065 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 CNTNAP2Q9UHC6 1331 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 CCDC195A0A1B0GUA6 201 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 F5H5T6 163 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 FGF18O76093 207 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 YWHAQP27348 245 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 DYNLT1P63172 113 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 EFHC2Q5JST6 749 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 C16orf59Q7L2K0 433 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 VSIG10LQ86VR7 867 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ADGRF2Q8IZF7 708 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TMEM35BQ8NCS4 154 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 WDR48Q8TAF3 677 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 RNF217Q8TC41 542 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 UNC45AQ9H3U1 944 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 KCND1Q9NSA2 647 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ANKEF1Q9NU02 776 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 AGPAT5Q9NUQ2 364 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ELOVL2Q9NXB9 296 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 SAMD15Q9P1V8 674 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 C10orf71Q711Q0 1435 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 DFFAO00273 331 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 BUB1BO60566 1050 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 IL18RAPO95256 599 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 NFATC1O95644 943 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ADH1CP00326 375 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 CSTF1Q05048 431 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TUBB2AQ13885 445 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TMEM164Q5U3C3 297 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 INTS8Q75QN2 995 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 SH2D3CQ8N5H7 860 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 MCUQ8NE86 351 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 P2RX5Q93086 422 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TUBB2BQ9BVA1 445 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 NHEJ1Q9H9Q4 299 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TUFT1Q9NNX1 390 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 MAN1C1Q9NR34 630 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TLR8Q9NR97 1041 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ABCC6O95255 1503 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 UBE4BO95155 1302 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 FAM237AA0A1B0GTK4 181 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 LGALS16A8MUM7 142 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 RNF225M0QZC1 329 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 STAMBPO95630 424 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CSH1P0DML2 217 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CSH2P0DML3 217 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 AMD1P17707 334 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 AXLP30530 894 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 IRF5Q13568 498 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CBX2Q14781 532 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 TMTC4Q5T4D3 741 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 FBXL19Q6PCT2 694 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 MTSS1LQ765P7 747 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 TAS2R42Q7RTR8 314 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CPLX4Q7Z7G2 160 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CCDC33Q8N5R6 958 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 KLHL23Q8NBE8 558 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CDC26Q8NHZ8 85 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 GLMNQ92990 594 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 DNAJC7Q99615 494 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 IL12RB2Q99665 862 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 NT5C1AQ9BXI3 368 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 NUSAP1Q9BXS6 441 aaKnown RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 SMARCAL1Q9NZC9 954 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 C5P01031 1676 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 TUBGCP6Q96RT7 1819 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 RASSF9O75901 435 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 EYA4O95677 639 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 S100BP04271 92 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 HSD17B4P51659 736 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 DRP2Q13474 957 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 FBXO47Q5MNV8 452 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 C1QTNF7Q9BXJ2 289 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 ARHGEF4Q9NR80 690 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 LIMA1Q9UHB6 759 aaKnown RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CHORDC1Q9UHD1 332 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 TLDC2A0PJX2 215 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 LRRIQ3A6PVS8 624 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 JUPP14923 745 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 EEF1GP26641 437 aaKnown RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 ETFBP38117 255 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 PMS1P54277 932 aaKnown RBP6.87□□□□□ -1.31
NEDD9-202ENST00000379446 KCNH2Q12809 1159 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 DUSP4Q13115 394 aa6.87□□□□□ -1.31
NEDD9-202ENST00000379446 CDKAL1Q5VV42 579 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms