RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 NOD1Q9Y239 953 aa16.62■□□□□ 0.25
HDAC8-209ENST00000373589 GIT1Q9Y2X7 761 aa16.62■□□□□ 0.25
HDAC8-209ENST00000373589 PSTPIP1O43586 416 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 MGEA5O60502 916 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 HEXIM1O94992 359 aaKnown RBP16.61■□□□□ 0.25
HDAC8-209ENST00000373589 GRK4P32298 578 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 LILRA4P59901 499 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 HTRA3P83110 453 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 PAK2Q13177 524 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 PDCLQ13371 301 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 ZNF268Q14587 947 aaPredicted RBP16.61■□□□□ 0.25
HDAC8-209ENST00000373589 SV2CQ496J9 727 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 PKDCCQ504Y2 493 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 AGMOQ6ZNB7 445 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 XYLT1Q86Y38 959 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 MCEEQ96PE7 176 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 HINFPQ9BQA5 517 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 DDX47Q9H0S4 455 aaKnown RBP16.61■□□□□ 0.25
HDAC8-209ENST00000373589 SLC38A7Q9NVC3 462 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 WDR35Q9P2L0 1181 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 SQORQ9Y6N5 450 aa16.61■□□□□ 0.25
HDAC8-209ENST00000373589 SIGLEC16A6NMB1 481 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 BHMG1C9JSJ3 638 aaPredicted RBP16.6■□□□□ 0.25
HDAC8-209ENST00000373589 MAP2K7O14733 419 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 ERBB2P04626 1255 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 PFKMP08237 780 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 FGFR1P11362 822 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 MLH1P40692 756 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 PSMC1P62191 440 aaKnown RBP16.6■□□□□ 0.25
HDAC8-209ENST00000373589 OGDHQ02218 1023 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 PPP2R5EQ16537 467 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 MAP9Q49MG5 647 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 ZNF618Q5T7W0 954 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 PPP1R26Q5T8A7 1209 aaPredicted RBP16.6■□□□□ 0.25
HDAC8-209ENST00000373589 DCUN1D2Q6PH85 259 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 ACOT1Q86TX2 421 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 SLC13A5Q86YT5 568 aaPredicted RBP16.6■□□□□ 0.25
HDAC8-209ENST00000373589 ZDHHC14Q8IZN3 488 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 CRYBG2Q8N1P7 616 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 NIPA2Q8N8Q9 360 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 OR6B3Q8NGW1 331 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 UBA3Q8TBC4 463 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 GAD1Q99259 594 aa16.6■□□□□ 0.25
HDAC8-209ENST00000373589 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC8-209ENST00000373589 GOLGA6L10A0A0M3HER8 536 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 A0A1W2PQ45 241 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 A0A1W2PQY0 241 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 RAB27AP51159 221 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 AFF1P51825 1210 aaKnown RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 TAS2R40P59535 323 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 DAB2IPQ5VWQ8 1189 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 ARHGAP17Q68EM7 881 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 TRAF7Q6Q0C0 670 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 DPH6Q7L8W6 267 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 RHOT1Q8IXI2 618 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 IFT20Q8IY31 132 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 AENQ8WTP8 325 aaKnown RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 LPPQ93052 612 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 MCRS1Q96EZ8 462 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 PLVAPQ9BX97 442 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 MIOSQ9NXC5 875 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 A0A0U1RQF3 1178 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 ARL5CA6NH57 179 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 A8MXQ7 604 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 FSCN2O14926 492 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 THP07101 528 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 FAM163BP0C2L3 166 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 KRT3P12035 628 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 GUCY2DQ02846 1103 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 PIGHQ14442 188 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 SIX1Q15475 284 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 GOLGA7BQ2TAP0 167 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 HDXQ7Z353 690 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 ADAT2Q7Z6V5 191 aaKnown RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 TTC30AQ86WT1 665 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 KATNAL2Q8IYT4 538 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 TOP6BLQ8N6T0 577 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 PRELID2Q8N945 189 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 APPL2Q8NEU8 664 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 FNIP1Q8TF40 1166 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 TRPV6Q9H1D0 765 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 DPEP3Q9H4B8 488 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 EPB41L5Q9HCM4 733 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 OGFRQ9NZT2 677 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 AMACRQ9UHK6 382 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-209ENST00000373589 PTCH2Q9Y6C5 1203 aa16.59■□□□□ 0.25
HDAC8-209ENST00000373589 ZSCAN5CA6NGD5 496 aaPredicted RBP16.58■□□□□ 0.24
HDAC8-209ENST00000373589 F8VP50 259 aa16.58■□□□□ 0.24
HDAC8-209ENST00000373589 CKBP12277 381 aa16.58■□□□□ 0.24
HDAC8-209ENST00000373589 RFC1P35251 1148 aaPredicted RBP16.58■□□□□ 0.24
HDAC8-209ENST00000373589 LRRC38Q5VT99 294 aa16.58■□□□□ 0.24
HDAC8-209ENST00000373589 MAATS1Q7Z4T9 603 aa16.58■□□□□ 0.24
HDAC8-209ENST00000373589 GSPT2Q8IYD1 628 aaKnown RBP16.58■□□□□ 0.24
HDAC8-209ENST00000373589 CCDC26Q8TAB7 109 aa16.58■□□□□ 0.24
HDAC8-209ENST00000373589 SYNCQ9H7C4 482 aa16.58■□□□□ 0.24
HDAC8-209ENST00000373589 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDAC8-209ENST00000373589 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms