RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 LAMC2Q13753 1193 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 POLNQ7Z5Q5 900 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 SHCBP1Q8NEM2 672 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 FAXDC2Q96IV6 333 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 C9orf72Q96LT7 481 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 PPP1R16BQ96T49 567 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 SMYD3Q9H7B4 428 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 CTNNAL1Q9UBT7 734 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 TJP2Q9UDY2 1190 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 A0A087WZ62 844 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 DNALI1O14645 258 aaPredicted RBP30.5■■■□□ 2.47
SSBP3-204ENST00000371320 LGALS2P05162 132 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 ZSCAN5DPP0CG00 497 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 VCPP55072 806 aaKnown RBP30.5■■■□□ 2.47
SSBP3-204ENST00000371320 ORC1Q13415 861 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 GJC2Q5T442 439 aaPredicted RBP30.5■■■□□ 2.47
SSBP3-204ENST00000371320 CHADLQ6NUI6 762 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 TMEM130Q8N3G9 435 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 HAUS1Q96CS2 278 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 CCDC77Q9BR77 488 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 FDXACB1Q9BRP7 624 aaPredicted RBP30.5■■■□□ 2.47
SSBP3-204ENST00000371320 SYNCQ9H7C4 482 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 FSBPO95073 299 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 MAGEA4P43358 317 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 JOSD2Q8TAC2 188 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 SPON1Q9HCB6 807 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 AKT3Q9Y243 479 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 CAPN7Q9Y6W3 813 aa30.5■■■□□ 2.47
SSBP3-204ENST00000371320 IFNAR2P48551 515 aa30.49■■■□□ 2.47
SSBP3-204ENST00000371320 AMHR2Q16671 573 aa30.49■■■□□ 2.47
SSBP3-204ENST00000371320 SLC4A11Q8NBS3 891 aa30.49■■■□□ 2.47
SSBP3-204ENST00000371320 CPXM1Q96SM3 734 aa30.49■■■□□ 2.47
SSBP3-204ENST00000371320 ZWILCHQ9H900 591 aa30.49■■■□□ 2.47
SSBP3-204ENST00000371320 MAGEB2O15479 319 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 ETS1P14921 441 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 PLCB3Q01970 1234 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 GPS1Q13098 491 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 OASLQ15646 514 aaKnown RBP30.48■■■□□ 2.47
SSBP3-204ENST00000371320 LRRC34Q8IZ02 419 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 NKD2Q969F2 451 aaPredicted RBP30.48■■■□□ 2.47
SSBP3-204ENST00000371320 CPB2Q96IY4 423 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 PDZD7Q9H5P4 517 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 WDR35Q9P2L0 1181 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 ANK1P16157 1881 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 KRT7P08729 469 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 PTPN11Q06124 597 aaPredicted RBP30.48■■■□□ 2.47
SSBP3-204ENST00000371320 STAT4Q14765 748 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 HADHQ16836 314 aaKnown RBP30.48■■■□□ 2.47
SSBP3-204ENST00000371320 FNIP1Q8TF40 1166 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 TWNKQ96RR1 684 aa30.48■■■□□ 2.47
SSBP3-204ENST00000371320 TPX2Q9ULW0 747 aaKnown RBP30.48■■■□□ 2.47
SSBP3-204ENST00000371320 TMEM120BA0PK00 339 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 C3orf70A6NLC5 250 aaPredicted RBP30.47■■■□□ 2.47
SSBP3-204ENST00000371320 LRCH4O75427 683 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 ITGAVP06756 1048 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 CYP2C8P10632 490 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 ATICP31939 592 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 SLC25A11Q02978 314 aaKnown RBP30.47■■■□□ 2.47
SSBP3-204ENST00000371320 ELOVL4Q9GZR5 314 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 ASB7Q9H672 318 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 HMGXB4Q9UGU5 601 aa30.47■■■□□ 2.47
SSBP3-204ENST00000371320 GOLGA6L7A0A1B0GV03 622 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 CILPO75339 1184 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 GH1P01241 217 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 VIMP08670 466 aaKnown RBP30.46■■■□□ 2.47
SSBP3-204ENST00000371320 CREB1P16220 341 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 SMTNL2Q2TAL5 461 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 CYP4F22Q6NT55 531 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 TAPT1Q6NXT6 567 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 XYLT1Q86Y38 959 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 IFNLR1Q8IU57 520 aaPredicted RBP30.46■■■□□ 2.47
SSBP3-204ENST00000371320 ARFGAP1Q8N6T3 406 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 CCDC197Q8NCU1 140 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 TMEM176AQ96HP8 235 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 SAYSD1Q9NPB0 183 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 LGALS13Q9UHV8 139 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 EVPLQ92817 2033 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 CDH16O75309 829 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 SNAPC2Q13487 334 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 ZNF268Q14587 947 aaPredicted RBP30.46■■■□□ 2.47
SSBP3-204ENST00000371320 VSTM1Q6UX27 236 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 LINC01465Q8N7H1 131 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 CXorf38Q8TB03 319 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 DYDC1Q8WWB3 177 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 CYP3A43Q9HB55 503 aa30.46■■■□□ 2.47
SSBP3-204ENST00000371320 METTL5Q9NRN9 209 aaKnown RBP30.46■■■□□ 2.47
SSBP3-204ENST00000371320 SGK1O00141 431 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 VTNP04004 478 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 ERBB2P04626 1255 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 ABHD2P08910 425 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 P4HA1P13674 534 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 MGARPQ8TDB4 240 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 TMEM121Q9BTD3 319 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 KCNK9Q9NPC2 374 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 TBK1Q9UHD2 729 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 NAALADL1Q9UQQ1 740 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 EFR3BQ9Y2G0 817 aa30.45■■■□□ 2.47
SSBP3-204ENST00000371320 H0YHG0 523 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 MICAL2O94851 1124 aa30.45■■■□□ 2.46
SSBP3-204ENST00000371320 IL1R2P27930 398 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms