RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 PGBD4Q96DM1 585 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 MTMR8Q96EF0 704 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 BTBD6Q96KE9 485 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 ITGB3P05106 788 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 CTSHP09668 335 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 CYP4A22Q5TCH4 519 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 SV2AQ7L0J3 742 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 ZC3H7BQ9UGR2 993 aaKnown RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 ATP9BO43861 1147 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 CETPP11597 493 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 CYP2B6P20813 491 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 TGFB2P61812 414 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 PHF20L1A8MW92 1017 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 UBTFL6P0CB48 400 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 NQO1P15559 274 aaKnown RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 DGKDQ16760 1214 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 C2CD6Q53TS8 623 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 ERO1BQ86YB8 467 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 SLC35C1Q96A29 364 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 MTMR12Q9C0I1 747 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 FAM192AQ9GZU8 254 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 MMADHCQ9H3L0 296 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 PLEKHA5Q9HAU0 1116 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 ALG13Q9NP73 1137 aaKnown RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 WARS2Q9UGM6 360 aaKnown RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 A0A0A6YYK5 440 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 WNT10BO00744 389 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 GPD1P21695 349 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 PGM5Q15124 567 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 KBTBD12Q3ZCT8 623 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 HIPK4Q8NE63 616 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 OR6P1Q8NGX9 317 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 ACTRT1Q8TDG2 376 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 PARD3BQ8TEW8 1205 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 WDR60Q8WVS4 1066 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 ASCC2Q9H1I8 757 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 TMEM165Q9HC07 324 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 RRN3P2A6NIE6 340 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 STRNO43815 780 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 MYBL2P10244 700 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 CLCN3P51790 818 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 MEI1Q5TIA1 1274 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 ACAD11Q709F0 780 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 C4orf33Q8N1A6 199 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 TTC8Q8TAM2 541 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 PDCD6IPQ8WUM4 868 aaKnown RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 RAPGEF5Q92565 580 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 SLC5A5Q92911 643 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 GCNAQ96QF7 691 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 KDM4CQ9H3R0 1056 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 SP110Q9HB58 689 aa13.85□□□□□ -0.19
PTPRK-204ENST00000368210 PSMC3IPQ9P2W1 217 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-204ENST00000368210 EML1O00423 815 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 FKBP1AP62942 108 aaKnown RBP13.84□□□□□ -0.19
PTPRK-204ENST00000368210 PRAMEP78395 509 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 CYP24A1Q07973 514 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 AGAP3Q96P47 875 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 GORASP1Q9BQQ3 440 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 PPCSQ9HAB8 311 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 PAK5Q9P286 719 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 TRIM16LQ309B1 348 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 SLC20A1Q8WUM9 679 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 MKL1Q969V6 931 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 PABPC3Q9H361 631 aaKnown RBP13.84□□□□□ -0.19
PTPRK-204ENST00000368210 METTL5Q9NRN9 209 aaKnown RBP13.84□□□□□ -0.19
PTPRK-204ENST00000368210 SEPT3Q9UH03 358 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 FAM47DPA6NHR8 397 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 MAPTP10636 758 aaKnown RBP13.84□□□□□ -0.19
PTPRK-204ENST00000368210 CPB1P15086 417 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 HOXD10P28358 340 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 ALKBH8Q96BT7 664 aaKnown RBP13.84□□□□□ -0.19
PTPRK-204ENST00000368210 GTSE1Q9NYZ3 720 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 CORO1CQ9ULV4 474 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-204ENST00000368210 ATRNO75882 1429 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 RRM1P23921 792 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 ACADSBP45954 432 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 RPS6KA3P51812 740 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 TBL3Q12788 808 aaKnown RBP13.84□□□□□ -0.19
PTPRK-204ENST00000368210 NOTUMQ6P988 496 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 C3orf62Q6ZUJ4 267 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 FAM129AQ9BZQ8 928 aa13.84□□□□□ -0.19
PTPRK-204ENST00000368210 TMEM120BA0PK00 339 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 SMAPO00193 183 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 PGK2P07205 417 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 GHRP10912 638 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 MTM1Q13496 603 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 THEMIS2Q5TEJ8 643 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 CEP19Q96LK0 163 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 FAM198AQ9UFP1 575 aa13.83□□□□□ -0.19
PTPRK-204ENST00000368210 DFFAO00273 331 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 PSTPIP1O43586 416 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 SLC47A2Q86VL8 602 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 DNAAF5Q86Y56 855 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 CERS5Q8N5B7 392 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 EZH1Q92800 747 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms