RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 KCNK10P57789 538 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 DDX39BQ13838 428 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 DNAL1Q4LDG9 190 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 MEI1Q5TIA1 1274 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 STX19Q8N4C7 294 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 ZSWIM2Q8NEG5 633 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 HPDLQ96IR7 371 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 TARS2Q9BW92 718 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 SMARCAD1Q9H4L7 1026 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 HAO1Q9UJM8 370 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 SH3BP1Q9Y3L3 701 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 ARHGAP31Q2M1Z3 1444 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 TCF7P36402 384 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 PAN2Q504Q3 1202 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 C16orf86Q6ZW13 317 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 CATSPER1Q8NEC5 780 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 FEZF2Q8TBJ5 459 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 DNAJC9Q8WXX5 260 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 CAAP1Q9H8G2 361 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 TMEM8AQ9HCN3 771 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 KCNH7Q9NS40 1196 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 GGA3Q9NZ52 723 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 TRIM49D1C9J1S8 452 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 EXTL3O43909 919 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 GH1P01241 217 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 SERPINB3P29508 390 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 GEMIN4P57678 1058 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 ERVK-24P63145 666 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 CCDC60Q8IWA6 550 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 PHF21AQ96BD5 680 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 DDX50Q9BQ39 737 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 MXRA8Q9BRK3 442 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 DLGAP2Q9P1A6 1054 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 LSM7Q9UK45 103 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 TRPM1Q7Z4N2 1603 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 SNRPAP09012 282 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 S100A5P33763 92 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 SERPINB10P48595 397 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 SOX10P56693 466 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 PRR23CQ6ZRP0 262 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 OTOAQ7RTW8 1153 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 ARID3BQ8IVW6 561 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 AGGF1Q8N302 714 aaeCLIP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 TFB1MQ8WVM0 346 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 JADE3Q92613 823 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 APOL2Q9BQE5 337 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 RHBDL2Q9NX52 303 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 RUVBL2Q9Y230 463 aaKnown RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 PRG3Q9Y2Y8 225 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-204ENST00000361796 DTNAQ9Y4J8 743 aa8.39□□□□□ -1.07
CTNND1-204ENST00000361796 SERPINI2O75830 405 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PRKCQQ04759 706 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 KYAT1Q16773 422 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 MFSD4BQ5TF39 518 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 SAMD7Q7Z3H4 446 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 ARHGAP18Q8N392 663 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 MTMR12Q9C0I1 747 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PAK5Q9P286 719 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PLEKHG2Q9H7P9 1386 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 M0QYT0 321 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PGK2P07205 417 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 KLC1Q07866 573 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PTGISQ16647 500 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 SV2CQ496J9 727 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 AGBL2Q5U5Z8 902 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 TTC39CQ8N584 583 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 TPCN2Q8NHX9 752 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 SEPT1Q8WYJ6 367 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PLEKHA8Q96JA3 519 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 ERP44Q9BS26 406 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 TEX13BQ9BXU2 312 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PIH1D1Q9NWS0 290 aaKnown RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 SPASTQ9UBP0 616 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 ZCCHC11Q5TAX3 1644 aaKnown RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 GRIN3BO60391 1043 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 RBP3P10745 1247 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PTGER2P43116 358 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 POU4F1Q01851 419 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PGS1Q32NB8 556 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PRR5LQ6MZQ0 368 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PPIL6Q8IXY8 311 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 ZNF786Q8N393 782 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 ZKSCAN4Q969J2 545 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 TRIM62Q9BVG3 475 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 CINPQ9BW66 212 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 H2AFY2Q9P0M6 372 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 VTNP04004 478 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 SERPINB9P50453 376 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 RCN1Q15293 331 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 EZH2Q15910 746 aaKnown RBP8.38□□□□□ -1.07
CTNND1-204ENST00000361796 NUDT18Q6ZVK8 323 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 KIRREL3Q8IZU9 778 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 ATG4CQ96DT6 458 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 CEP41Q9BYV8 373 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 ISCUQ9H1K1 167 aa8.38□□□□□ -1.07
CTNND1-204ENST00000361796 PHTF1Q9UMS5 762 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms