RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SKILP12757 684 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 PTPN1P18031 435 aaKnown RBP27.02■■□□□ 1.92
SSBP3-202ENST00000357475 MDH1BQ5I0G3 518 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 ZNF397Q8NF99 534 aaPredicted RBP27.02■■□□□ 1.92
SSBP3-202ENST00000357475 PDLIM2Q96JY6 352 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 HEXIM2Q96MH2 286 aaKnown RBP27.02■■□□□ 1.92
SSBP3-202ENST00000357475 DNAJC7Q99615 494 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 AIPL1Q9NZN9 384 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 BACE2Q9Y5Z0 518 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 REV3LO60673 3130 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 PTPRDP23468 1912 aa27.02■■□□□ 1.92
SSBP3-202ENST00000357475 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.01■■□□□ 1.91
SSBP3-202ENST00000357475 CFHP08603 1231 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 TPM1P09493 284 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 CCDC130P13994 396 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 PCSK1P29120 753 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 ASIC2Q16515 512 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 WDR59Q6PJI9 974 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 NOP9Q86U38 636 aaKnown RBP27.01■■□□□ 1.91
SSBP3-202ENST00000357475 SLC20A1Q8WUM9 679 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 IMPACTQ9P2X3 320 aa27.01■■□□□ 1.91
SSBP3-202ENST00000357475 H7C4K7 107 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 CNPP09543 421 aaKnown RBP27■■□□□ 1.91
SSBP3-202ENST00000357475 CD19P15391 556 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 CYP11B1P15538 503 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 GNA15P30679 374 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 OR1D2P34982 312 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 FAM171BQ6P995 826 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 ANP32BQ92688 251 aaKnown RBP27■■□□□ 1.91
SSBP3-202ENST00000357475 PGLYRP2Q96PD5 576 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 RHOBTB2Q9BYZ6 727 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 STK39Q9UEW8 545 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 C2orf71A6NGG8 1288 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 OR6C75A6NL08 312 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 CLDN5O00501 218 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 TEX28O15482 410 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 PLEKP08567 350 aaPredicted RBP27■■□□□ 1.91
SSBP3-202ENST00000357475 PAEPP09466 180 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 SLC39A12Q504Y0 691 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 PPP1R26Q5T8A7 1209 aaPredicted RBP27■■□□□ 1.91
SSBP3-202ENST00000357475 SLC8B1Q6J4K2 584 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 CCDC186Q7Z3E2 898 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 CNGA4Q8IV77 575 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 MRPL43Q8N983 215 aaKnown RBP27■■□□□ 1.91
SSBP3-202ENST00000357475 OR8K1Q8NGG5 319 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 MICAL1Q8TDZ2 1067 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 EPS8L1Q8TE68 723 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 TNIP3Q96KP6 325 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 RXFP1Q9HBX9 757 aa27■■□□□ 1.91
SSBP3-202ENST00000357475 NOCTQ9UK39 431 aaKnown RBP27■■□□□ 1.91
SSBP3-202ENST00000357475 VNN2O95498 520 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 FERP16591 822 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 TSPY1Q01534 308 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 ROR1Q01973 937 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 SMC1AQ14683 1233 aaKnown RBP26.99■■□□□ 1.91
SSBP3-202ENST00000357475 TAF3Q5VWG9 929 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 HGSNATQ68CP4 663 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 RNF19BQ6ZMZ0 732 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 PAQR9Q6ZVX9 377 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 MYCBPAPQ8TBZ2 947 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 DDX1Q92499 740 aaKnown RBP26.99■■□□□ 1.91
SSBP3-202ENST00000357475 MYLPFQ96A32 169 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 PCED1BQ96HM7 432 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 B3GNT5Q9BYG0 378 aa26.99■■□□□ 1.91
SSBP3-202ENST00000357475 MYH10P35580 1976 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 FAM170AA1A519 330 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 WDR27A2RRH5 827 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 THAP12O43422 761 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 CPB1P15086 417 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 PTK2Q05397 1052 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 OLIG1Q8TAK6 271 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 ZNF606Q8WXB4 792 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 SYN2Q92777 582 aaPredicted RBP26.98■■□□□ 1.91
SSBP3-202ENST00000357475 KLHL5Q96PQ7 755 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 PRDM12Q9H4Q4 367 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 IRAK3Q9Y616 596 aa26.98■■□□□ 1.91
SSBP3-202ENST00000357475 VDRP11473 427 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 CHRNB2P17787 502 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 ADORA2BP29275 332 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 HNRNPH3P31942 346 aaKnown RBP26.97■■□□□ 1.91
SSBP3-202ENST00000357475 GRIN2CQ14957 1233 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 ADGRD2Q7Z7M1 963 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 GPR65Q8IYL9 337 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 FUKQ8N0W3 1084 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 SLC2A14Q8TDB8 520 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 CYFIP2Q96F07 1278 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 NUCKS1Q9H1E3 243 aaKnown RBP26.97■■□□□ 1.91
SSBP3-202ENST00000357475 CRISPLD1Q9H336 500 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 HAUS4Q9H6D7 363 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 FNIP2Q9P278 1114 aa26.97■■□□□ 1.91
SSBP3-202ENST00000357475 O00370 1275 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 CACNA2D1P54289 1103 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 CYP27A1Q02318 531 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 SGO2Q562F6 1265 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 PALB2Q86YC2 1186 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 TTC9BQ8N6N2 239 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 CHP1Q99653 195 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 ZNF518BQ9C0D4 1074 aa26.96■■□□□ 1.91
SSBP3-202ENST00000357475 NGRNQ9NPE2 291 aaKnown RBP26.96■■□□□ 1.91
SSBP3-202ENST00000357475 ARHGAP20Q9P2F6 1191 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms