RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CARMIL3Q8ND23 1372 aa6.28□□□□□ -1.4
RFC1-201ENST00000349703 GRM8O00222 908 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TEX28O15482 410 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 POLR2DO15514 142 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 N4BP1O75113 896 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 PIAS2O75928 621 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 RFC1P35251 1148 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 LACTBP83111 547 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 ID3Q02535 119 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 YWHAHQ04917 246 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 PPP1R8Q12972 351 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 TOB2Q14106 344 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 SLC39A14Q15043 492 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 IFI16Q16666 785 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 VWA3BQ502W6 1294 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 ZNF449Q6P9G9 518 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 EMBQ6PCB8 327 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 CROCCP2Q86T23 111 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 VPS52Q8N1B4 723 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 SLC15A4Q8N697 577 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 FAM156AQ8NDB6 213 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 PPP2R3CQ969Q6 453 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 PAWRQ96IZ0 340 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 SELENOSQ9BQE4 189 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 PBX4Q9BYU1 374 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 FARSBQ9NSD9 589 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 TCP11L1Q9NUJ3 509 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 PIH1D1Q9NWS0 290 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 GMIPQ9P107 970 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TLK1Q9UKI8 766 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TIMM13Q9Y5L4 95 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 M0R2N6 131 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 CAPN9O14815 690 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 VPREB1P12018 145 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 ATP6V1B1P15313 513 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 NDUFB7P17568 137 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 CTNNA2P26232 953 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 HADHAP40939 763 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 BCL6P41182 706 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 RPS6KA3P51812 740 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 KCNK10P57789 538 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 PNOCQ13519 176 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 CHRNA2Q15822 529 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 VPS72Q15906 364 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TTC38Q5R3I4 469 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 SPATA1Q5VX52 437 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 WDR93Q6P2C0 686 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TSSK4Q6SA08 328 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TOGARAM2Q6ZUX3 1019 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TTC5Q8N0Z6 440 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 CCDC155Q8N6L0 562 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 MAGEB6Q8N7X4 407 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.27□□□□□ -1.413e-6■■■■■ 50.8
RFC1-201ENST00000349703 PGBD4Q96DM1 585 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TRIM7Q9C029 511 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 LUZP4Q9P127 313 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 LCMT1Q9UIC8 334 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 DGKBQ9Y6T7 804 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 SBNO1A3KN83 1393 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TTC34A8MYJ7 566 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 H3BQF6 201 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 PIK3R2O00459 728 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 EIF3HO15372 352 aaKnown RBP eCLIP6.27□□□□□ -1.41
RFC1-201ENST00000349703 F11P03951 625 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 ALOX12P18054 663 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TRIM21P19474 475 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 MAPK4P31152 587 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 ST13P50502 369 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 USP14P54578 494 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 MECOMQ03112 1051 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 LMTK2Q8IWU2 1503 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 UNC5BQ8IZJ1 945 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 NLGN1Q8N2Q7 840 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TOP6BLQ8N6T0 577 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TRIM58Q8NG06 486 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 WDR24Q96S15 920 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 ATXN2Q99700 1313 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 C10orf88Q9H8K7 445 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 ACTL7BQ9Y614 415 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 A0A0D9SFI3 127 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 SMCO2A6NFE2 343 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 E7EVH7 732 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 CLIC2O15247 247 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 GPTP24298 496 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 PBX2P40425 430 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 LGALS4P56470 323 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 SLC8A3P57103 927 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 NOP14P78316 857 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 FNDC3BQ53EP0 1204 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 PRAMEF13Q5VWM6 474 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 SWSAP1Q6NVH7 229 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 SDCCAG8Q86SQ7 713 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 NLRP14Q86W24 1093 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 DMRTC2Q8IXT2 367 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 GSPT2Q8IYD1 628 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 SMYD4Q8IYR2 804 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 LINS1Q8NG48 757 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 FAM81AQ8TBF8 368 aa6.27□□□□□ -1.41
RFC1-201ENST00000349703 TNKS2Q9H2K2 1166 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms