RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MEIS2O14770 477 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 GLRA2P23416 452 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 CYP3A7P24462 503 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 CHN2P52757 468 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 UBAP2LQ14157 1087 aaKnown RBP16.09■□□□□ 0.17
LMNA-201ENST00000347559 HIF1AQ16665 826 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 BBS9Q3SYG4 887 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 EFHC2Q5JST6 749 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 PALM2Q8IXS6 379 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 RNF168Q8IYW5 571 aaPredicted RBP16.09■□□□□ 0.17
LMNA-201ENST00000347559 PLEKHO2Q8TD55 490 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 IQCGQ9H095 443 aaKnown RBP16.09■□□□□ 0.17
LMNA-201ENST00000347559 TAGLN3Q9UI15 199 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 CLUHO75153 1309 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 C15orf38-AP3S2A0A0A6YYH1 394 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 PRR5-ARHGAP8B1AHC4 643 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 ARHGAP8P85298 464 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
LMNA-201ENST00000347559 CBX3Q13185 183 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 HIC1Q14526 733 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 TMEM259Q4ZIN3 620 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 SYDE2Q5VT97 1194 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 KLHDC10Q6PID8 442 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 ARPINQ7Z6K5 226 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 POU5F2Q8N7G0 328 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 FAM84AQ96KN4 292 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 TMEM121Q9BTD3 319 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 CYP4F11Q9HBI6 524 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 PLA2G4CQ9UP65 541 aa16.09■□□□□ 0.17
LMNA-201ENST00000347559 VILLO15195 856 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 SLC26A4O43511 780 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 CLPTM1O96005 669 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 CYLC2Q14093 348 aaPredicted RBP16.08■□□□□ 0.17
LMNA-201ENST00000347559 DNAL1Q4LDG9 190 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 C1orf228Q6PIY5 440 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 RNF111Q6ZNA4 994 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 IKBKGQ9Y6K9 419 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 ATRNL1Q5VV63 1379 aa16.08■□□□□ 0.17
LMNA-201ENST00000347559 I3L4J1 428 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 FKBP6O75344 327 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 ZNF189O75820 626 aaPredicted RBP16.08■□□□□ 0.16
LMNA-201ENST00000347559 FUT4P22083 530 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 PHBP35232 272 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 AQP5P55064 265 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 TMPRSS15P98073 1019 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 ALCAMQ13740 583 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 RABGAP1LQ5R372 815 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 PASD1Q8IV76 773 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 RHOT1Q8IXI2 618 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 ARHGEF38Q9NXL2 777 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 VAV3Q9UKW4 847 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 MYOCOSA0A1B0GUC4 107 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 DENND3A2RUS2 1198 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 LIASO43766 372 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 ATP9BO43861 1147 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 SLITRK3O94933 977 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 ITPK1Q13572 414 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 MSS51Q4VC12 460 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 EFHC1Q5JVL4 640 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 SYCP2LQ5T4T6 812 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 TMCO4Q5TGY1 634 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 FBXL19Q6PCT2 694 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 NLRX1Q86UT6 975 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 PIP4K2CQ8TBX8 421 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 SHC3Q92529 594 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 SERAC1Q96JX3 654 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 C11orf70Q9BRQ4 267 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 USP29Q9HBJ7 922 aa16.08■□□□□ 0.16
LMNA-201ENST00000347559 CDK4P11802 303 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 UBXN2AP68543 259 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 ZNF200P98182 395 aaPredicted RBP16.07■□□□□ 0.16
LMNA-201ENST00000347559 FOLH1Q04609 750 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 HNRNPDQ14103 355 aaKnown RBP16.07■□□□□ 0.16
LMNA-201ENST00000347559 NFIL3Q16649 462 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 CLEC16AQ2KHT3 1053 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 NADK2Q4G0N4 442 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 RALGPS1Q5JS13 557 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 C1orf220Q5T0J3 134 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 FAM182AQ5T1J6 154 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 PAOXQ6QHF9 649 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 MCOLN2Q8IZK6 566 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 FBXO36Q8NEA4 188 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 FAM20AQ96MK3 541 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 KAT6AQ92794 2004 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 CAPN8A6NHC0 703 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 CAPN14A8MX76 684 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 C6orf222P0C671 652 aaPredicted RBP16.07■□□□□ 0.16
LMNA-201ENST00000347559 MPP3Q13368 585 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 DLGAP5Q15398 846 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
LMNA-201ENST00000347559 ATP11CQ8NB49 1132 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 ICA1LQ8NDH6 482 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 VTI1AQ96AJ9 217 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 HSPBAP1Q96EW2 488 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms