RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RILPQ96NA2 401 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 OLFML3Q9NRN5 406 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 ERICH4A6NGS2 130 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 TSPAN3O60637 253 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 SPATA31D3P0C874 917 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 SLC1A1P43005 524 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 OXCT1P55809 520 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 ZNF200P98182 395 aaPredicted RBP13.44□□□□□ -0.26
LIN54-201ENST00000340417 GRB14Q14449 540 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 SPATA31D4Q6ZUB0 917 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 CENPUQ71F23 418 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 BRSK2Q8IWQ3 736 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 CDC26Q8NHZ8 85 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 MORC4Q8TE76 937 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 PYROXD1Q8WU10 500 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 BFARQ9NZS9 450 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 SNX2O60749 519 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 PCDH8O95206 1070 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 RPL9P32969 192 aaKnown RBP13.44□□□□□ -0.26
LIN54-201ENST00000340417 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
LIN54-201ENST00000340417 NPAS4Q8IUM7 802 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 FBXL16Q8N461 479 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 KIF2CQ99661 725 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 YIPF2Q9BWQ6 316 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 WNT8AQ9H1J5 351 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 CISHQ9NSE2 258 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 PCDHA2Q9Y5H9 948 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
LIN54-201ENST00000340417 C3orf70A6NLC5 250 aaPredicted RBP13.44□□□□□ -0.26
LIN54-201ENST00000340417 IGF2BP3O00425 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
LIN54-201ENST00000340417 SETSIPP0DME0 302 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 NDST1P52848 882 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 PPARDQ03181 441 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 GPM6BQ13491 265 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 RFFLQ8WZ73 363 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 SMG7Q92540 1137 aaKnown RBP13.44□□□□□ -0.26
LIN54-201ENST00000340417 TRIM54Q9BYV2 358 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 GPR63Q9BZJ6 419 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 CAPSQ13938 189 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 FAM76AQ8TAV0 307 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 SLC30A1Q9Y6M5 507 aa13.44□□□□□ -0.26
LIN54-201ENST00000340417 CYP3A7-CYP3A51PA0A087WV96 503 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TTC26A0AVF1 554 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 CYP3A7P24462 503 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 PTENP60484 403 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 SLMAPQ14BN4 828 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 PCSK7Q16549 785 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TTPALQ9BTX7 342 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TMEM117Q9H0C3 514 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TEX33O43247 280 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 CBX1P83916 185 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 DR1Q01658 176 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 RAPGEF5Q92565 580 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TCF25Q9BQ70 676 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 DCLK3Q9C098 648 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 DNM1LO00429 736 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 DARSP14868 501 aaKnown RBP13.43□□□□□ -0.26
LIN54-201ENST00000340417 PAX3P23760 479 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 PTPN11Q06124 597 aaPredicted RBP13.43□□□□□ -0.26
LIN54-201ENST00000340417 AGXT2Q9BYV1 514 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 BRD9Q9H8M2 597 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.43□□□□□ -0.26
LIN54-201ENST00000340417 ZNF112Q9UJU3 913 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 ZNF214Q9UL59 606 aaPredicted RBP13.43□□□□□ -0.26
LIN54-201ENST00000340417 ENDOD1O94919 500 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 EIF3EP60228 445 aaKnown RBP13.43□□□□□ -0.26
LIN54-201ENST00000340417 MAP7Q14244 749 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TAF1BQ53T94 588 aaPredicted RBP13.43□□□□□ -0.26
LIN54-201ENST00000340417 SCG3Q8WXD2 468 aaKnown RBP13.43□□□□□ -0.26
LIN54-201ENST00000340417 TSEN34Q9BSV6 310 aaKnown RBP13.43□□□□□ -0.26
LIN54-201ENST00000340417 CNTNAP1P78357 1384 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 PSMD3O43242 534 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TBX4P57082 545 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 SLC12A1Q13621 1099 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 WSCD1Q658N2 575 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 AGAP3Q96P47 875 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 TXNRD2Q9NNW7 524 aa13.43□□□□□ -0.26
LIN54-201ENST00000340417 CSH1P0DML2 217 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 CSH2P0DML3 217 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 EARS2Q5JPH6 523 aaKnown RBP13.42□□□□□ -0.26
LIN54-201ENST00000340417 PPHLN1Q8NEY8 458 aaKnown RBP13.42□□□□□ -0.26
LIN54-201ENST00000340417 GDAP1L1Q96MZ0 367 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 FOPNLQ96NB1 174 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 RNF14Q9UBS8 474 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 STRCQ7RTU9 1775 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
LIN54-201ENST00000340417 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 ATP9BO43861 1147 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 FGRP09769 529 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 ITGB3BPQ13352 177 aaPredicted RBP13.42□□□□□ -0.26
LIN54-201ENST00000340417 EGFL8Q99944 293 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.42□□□□□ -0.26
LIN54-201ENST00000340417 UVRAGQ9P2Y5 699 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 GJB7Q6PEY0 223 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 TAS1R2Q8TE23 839 aa13.42□□□□□ -0.26
LIN54-201ENST00000340417 USP13Q92995 863 aaPredicted RBP13.42□□□□□ -0.26
LIN54-201ENST00000340417 LIMA1Q9UHB6 759 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms