RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 CCDC142Q17RM4 750 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 ZNF699Q32M78 642 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 TDRD10Q5VZ19 366 aaKnown RBP12.15□□□□□ -0.46
MRPL55-203ENST00000336520 TANGO2Q6ICL3 276 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 SMYD4Q8IYR2 804 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-203ENST00000336520 TMEM105Q8N8V8 129 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 ENGASEQ8NFI3 743 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 ZSCAN18Q8TBC5 510 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-203ENST00000336520 TMC2Q8TDI7 906 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 TMEM174Q8WUU8 243 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 KBTBD7Q8WVZ9 684 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 ELSPBP1Q96BH3 223 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 ASB16Q96NS5 453 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 LRRC3Q9BY71 257 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 GPR88Q9GZN0 384 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 TBC1D17Q9HA65 648 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 CDH9Q9ULB4 789 aa12.15□□□□□ -0.46
MRPL55-203ENST00000336520 KMT2EQ8IZD2 1858 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 MYBPHLA2RUH7 354 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 ATP2C2O75185 946 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 STAU1O95793 577 aaKnown RBP12.14□□□□□ -0.47
MRPL55-203ENST00000336520 FCARP24071 287 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 CYP2F1P24903 491 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 LMO2P25791 158 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 CDC25CP30307 473 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 GNL1P36915 607 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-203ENST00000336520 VAMP7P51809 220 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 DLG4P78352 724 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 CLDN10P78369 228 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 GRM2Q14416 872 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 MAPRE1Q15691 268 aaKnown RBP12.14□□□□□ -0.47
MRPL55-203ENST00000336520 ZNF667Q5HYK9 610 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 GPR158Q5T848 1215 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 CWF19L1Q69YN2 538 aaKnown RBP12.14□□□□□ -0.47
MRPL55-203ENST00000336520 POTEHQ6S545 545 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 C4orf50Q6ZRC1 276 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 INTS8Q75QN2 995 aaKnown RBP12.14□□□□□ -0.47
MRPL55-203ENST00000336520 GAREM2Q75VX8 874 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 LIMS2Q7Z4I7 341 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 SCN4BQ8IWT1 228 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 FAM186BQ8IYM0 893 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 OR6B3Q8NGW1 331 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 MYLPFQ96A32 169 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 SHDQ96IW2 340 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 TIGD1Q96MW7 591 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 GSDMAQ96QA5 445 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 PKMYT1Q99640 499 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 MRPL45Q9BRJ2 306 aaKnown RBP12.14□□□□□ -0.47
MRPL55-203ENST00000336520 PLA2G2FQ9BZM2 168 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 BRD9Q9H8M2 597 aa12.14□□□□□ -0.47
MRPL55-203ENST00000336520 MAGED2Q9UNF1 606 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-203ENST00000336520 MAPK13O15264 365 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 TACC1O75410 805 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 AKAP3O75969 853 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 CSH1P0DML2 217 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 CSH2P0DML3 217 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 P4HA1P13674 534 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 NPR3P17342 541 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 AOC1P19801 751 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 PSMC2P35998 433 aaKnown RBP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 ANP32AP39687 249 aaKnown RBP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 VIPR2P41587 438 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 GPR15P49685 360 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 PTPN5P54829 565 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 ADAM9Q13443 819 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 NFIL3Q16649 462 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 DDR2Q16832 855 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 CFAP221Q4G0U5 840 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 STXBP5Q5T5C0 1151 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 ZNF658Q5TYW1 1059 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 SDHAF4Q5VUM1 108 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 SCARA5Q6ZMJ2 495 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 YAF2Q8IY57 180 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 PRSS33Q8NF86 280 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 E2F7Q96AV8 911 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 FUBP3Q96I24 572 aaKnown RBP eCLIP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 TRMT61BQ9BVS5 477 aaKnown RBP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 GTPBP4Q9BZE4 634 aaKnown RBP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 XYLT2Q9H1B5 865 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 TRPV4Q9HBA0 871 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 CRTAC1Q9NQ79 661 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-203ENST00000336520 PCDHA5Q9Y5H7 936 aa12.13□□□□□ -0.47
MRPL55-203ENST00000336520 A8MXQ7 604 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 DPYSL4O14531 572 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 IKBKBO14920 756 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-203ENST00000336520 VNN1O95497 513 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 C4BPAP04003 597 aaKnown RBP12.12□□□□□ -0.47
MRPL55-203ENST00000336520 FAM163BP0C2L3 166 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 TRIM49P0CI25 452 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 TRIM49CP0CI26 452 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 PSMC3P17980 439 aa12.12□□□□□ -0.47
MRPL55-203ENST00000336520 BDNFP23560 247 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms