RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 WARSP23381 471 aaKnown RBP13.54□□□□□ -0.24
DDX39A-202ENST00000324340 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-202ENST00000324340 CALRP27797 417 aaKnown RBP13.54□□□□□ -0.24
DDX39A-202ENST00000324340 NDST1P52848 882 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 CLEC16AQ2KHT3 1053 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 MAP9Q49MG5 647 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 ZNF394Q53GI3 561 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 H2AFVQ71UI9 128 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 COLGALT2Q8IYK4 626 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 TMEM199Q8N511 208 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 APPL2Q8NEU8 664 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 TFAP2BQ92481 460 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 PAAF1Q9BRP4 392 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-202ENST00000324340 TAS2R14Q9NYV8 317 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 BCCIPQ9P287 314 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDX39A-202ENST00000324340 CACNG4Q9UBN1 327 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 TRIM10Q9UDY6 481 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 LRFN2Q9ULH4 789 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 NME7Q9Y5B8 376 aa13.54□□□□□ -0.24
DDX39A-202ENST00000324340 TSC2P49815 1807 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 A0A0A6YYK5 440 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 CYB561D2O14569 222 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 GABRDO14764 452 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 MED7O43513 233 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 B4GALT3O60512 393 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 HUS1O60921 280 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 EFCAB14O75071 495 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 VDRP11473 427 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 CSF2RAP15509 400 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 IBSPP21815 317 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 CDH5P33151 784 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 GALCP54803 685 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 CENPCQ03188 943 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 TCEAL1Q15170 157 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 ACAD10Q6JQN1 1059 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 PPP1R2P3Q6NXS1 205 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■■■□ 20.8
DDX39A-202ENST00000324340 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 CRYBG2Q8N1P7 616 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 TMEM86AQ8N2M4 240 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 RUBCNQ92622 972 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 SENP8Q96LD8 212 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 MRPL9Q9BYD2 267 aaKnown RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 LHX5Q9H2C1 402 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 STXBP5LQ9Y2K9 1186 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 DUSP10Q9Y6W6 482 aa13.53□□□□□ -0.24
DDX39A-202ENST00000324340 KIAA0100Q14667 2235 aaKnown RBP13.53□□□□□ -0.24
DDX39A-202ENST00000324340 COL4A6Q14031 1691 aa13.52□□□□□ -0.24
DDX39A-202ENST00000324340 M0QZQ0 153 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 FANCGO15287 622 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 KIF5CO60282 957 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 FTLP02792 175 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-202ENST00000324340 CFHP08603 1231 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 NOMO3P69849 1222 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 STILQ15468 1287 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 TIGD5Q53EQ6 642 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 ADGRF2Q8IZF7 708 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-202ENST00000324340 ZNF518BQ9C0D4 1074 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 ANKZF1Q9H8Y5 726 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 GUCA1BQ9UMX6 200 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDX39A-202ENST00000324340 NCANO14594 1321 aa13.52□□□□□ -0.25
DDX39A-202ENST00000324340 O00370 1275 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 DGKIO75912 1065 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 B3GAT3O94766 335 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 CYP11A1P05108 521 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 GNL1P36915 607 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-202ENST00000324340 SATB1Q01826 763 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 CASP8Q14790 479 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 CNGA2Q16280 664 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 WSCD1Q658N2 575 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 ARHGAP17Q68EM7 881 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 OSTM1Q86WC4 334 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 PHF13Q86YI8 300 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-202ENST00000324340 OR6B3Q8NGW1 331 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 TOP1MTQ969P6 601 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 RPGRIP1Q96KN7 1286 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 SUSD3Q96L08 255 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 HEXIM2Q96MH2 286 aaKnown RBP13.51□□□□□ -0.25
DDX39A-202ENST00000324340 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-202ENST00000324340 DNAI2Q9GZS0 605 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 SNX25Q9H3E2 840 aa13.51□□□□□ -0.25
DDX39A-202ENST00000324340 NRDE2Q9H7Z3 1164 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms