RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ALYREFQ86V81 257 aaKnown RBP21.28■■□□□ 1
PDZRN3-202ENST00000308537 DCP1BQ8IZD4 617 aaKnown RBP21.28■■□□□ 1
PDZRN3-202ENST00000308537 DTWD2Q8NBA8 298 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 CCDC127Q96BQ5 260 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 EXOC1Q9NV70 894 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 ABI2Q9NYB9 513 aaPredicted RBP21.28■■□□□ 1
PDZRN3-202ENST00000308537 ATP6V1DQ9Y5K8 247 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 FANCMQ8IYD8 2048 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 MYBPHLA2RUH7 354 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 GABRR2P28476 465 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 MRE11P49959 708 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 ZNF687Q8N1G0 1237 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 STKLD1Q8NE28 680 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 PJA1Q8NG27 643 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 PARD3BQ8TEW8 1205 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 CRTAC1Q9NQ79 661 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 GTF3C4Q9UKN8 822 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 MTF2Q9Y483 593 aaPredicted RBP21.27■■□□□ 1
PDZRN3-202ENST00000308537 PCDHB5Q9Y5E4 795 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 FAM186AA6NE01 2351 aa21.27■■□□□ 1
PDZRN3-202ENST00000308537 LRRIQ3A6PVS8 624 aaPredicted RBP21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 TULP1O00294 542 aaPredicted RBP21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 PDXKO00764 312 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 ATP2C2O75185 946 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 STAU1O95793 577 aaKnown RBP21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 TNNI1P19237 187 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 WARSP23381 471 aaKnown RBP21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 LHX1P48742 406 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 TSPY1Q01534 308 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 PRKCQQ04759 706 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 NFE2Q16621 373 aaPredicted RBP21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 C1orf220Q5T0J3 134 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 ITIH5Q86UX2 942 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 GIPC2Q8TF65 315 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 DNASE1L2Q92874 299 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 PI4K2AQ9BTU6 479 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 GPR88Q9GZN0 384 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 ABCB6Q9NP58 842 aa21.26■□□□□ 0.99
PDZRN3-202ENST00000308537 KANSL1LA0AUZ9 987 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 EXOC3O60645 756 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 PRPF40AO75400 957 aaKnown RBP21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 TADA3O75528 432 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 ZNF202O95125 648 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 F11P03951 625 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 DCNP07585 359 aaKnown RBP21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 PSMC3P17980 439 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 CYP2F1P24903 491 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 WEE1P30291 646 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 CYP4F8P98187 520 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 MYL7Q01449 175 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 PFKPQ01813 784 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 FCHO2Q0JRZ9 810 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 MYO1EQ12965 1108 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 FZD5Q13467 585 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 CFAP221Q4G0U5 840 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 SDHAF4Q5VUM1 108 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 TDRD10Q5VZ19 366 aaKnown RBP21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 ARID3BQ8IVW6 561 aaPredicted RBP21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 MFSD6LQ8IWD5 586 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 GOLGA5Q8TBA6 731 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 FNBP1Q96RU3 617 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 MRPL45Q9BRJ2 306 aaKnown RBP21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 VRTNQ9H8Y1 702 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 TRPV5Q9NQA5 729 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 HEBP1Q9NRV9 189 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 TRAF3IP3Q9Y228 551 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 GVINP1Q7Z2Y8 2422 aa21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 ZNF638Q14966 1978 aaKnown RBP21.25■□□□□ 0.99
PDZRN3-202ENST00000308537 HEPACAM2A8MVW5 462 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 TACC1O75410 805 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 VNN1O95497 513 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 PRAMEF12O95522 483 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 C4BPAP04003 597 aaKnown RBP21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 CD72P21854 359 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 MYL6P60660 151 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 DLG4P78352 724 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 FMR1NBQ8N0W7 255 aaPredicted RBP21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 ENGASEQ8NFI3 743 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 DEPDC1BQ8WUY9 529 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 TRMT61BQ9BVS5 477 aaKnown RBP21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 ATXN3LQ9H3M9 355 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 LTB4R2Q9NPC1 389 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 SIT1Q9Y3P8 196 aa21.24■□□□□ 0.99
PDZRN3-202ENST00000308537 PTPRZ1P23471 2315 aaPredicted RBP21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 PROB1E7EW31 1015 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 NR3C1P04150 777 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 TARSP26639 723 aaKnown RBP21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 PCSK1P29120 753 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 NBL1P41271 181 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 NLRP12P59046 1061 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 PSMC1P62191 440 aaKnown RBP21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 KCNB1Q14721 858 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 NFIL3Q16649 462 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 DDR2Q16832 855 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 ZCWPW2Q504Y3 356 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 GPR158Q5T848 1215 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 GPIHBP1Q8IV16 184 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 FUBP3Q96I24 572 aaKnown RBP eCLIP21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 SHDQ96IW2 340 aa21.23■□□□□ 0.99
PDZRN3-202ENST00000308537 SYT15Q9BQS2 421 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms