RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
COPS2-201ENST00000299259 UNC93B1Q9H1C4 597 aa11.12□□□□□ -0.63
COPS2-201ENST00000299259 RSAD1Q9HA92 442 aa11.12□□□□□ -0.63
COPS2-201ENST00000299259 IP6K2Q9UHH9 426 aa11.12□□□□□ -0.63
COPS2-201ENST00000299259 L1RE1Q9UN81 338 aa11.12□□□□□ -0.63
COPS2-201ENST00000299259 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
COPS2-201ENST00000299259 PCDHA3Q9Y5H8 950 aa11.12□□□□□ -0.63
COPS2-201ENST00000299259 A0A0U1RQF3 1178 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 KRIT1O00522 736 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 HUS1O60921 280 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 SCNN1GP51170 649 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 RWDD2BP57060 319 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 RPL7AP62424 266 aaKnown RBP11.11□□□□□ -0.63
COPS2-201ENST00000299259 LONRF2Q1L5Z9 754 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 GLE1Q53GS7 698 aaKnown RBP11.11□□□□□ -0.63
COPS2-201ENST00000299259 PPP1R15BQ5SWA1 713 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 CC2D1AQ6P1N0 951 aaPredicted RBP11.11□□□□□ -0.63
COPS2-201ENST00000299259 TRAF7Q6Q0C0 670 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 C12orf29Q8N999 325 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 C18orf8Q96DM3 657 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 KRT12Q99456 494 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 PLVAPQ9BX97 442 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 AP1M1Q9BXS5 423 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
COPS2-201ENST00000299259 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 ARFGAP3Q9NP61 516 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 FAM49BQ9NUQ9 324 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 WDR35Q9P2L0 1181 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
COPS2-201ENST00000299259 GOLGA6L10A0A0M3HER8 536 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 TMEM191CA6NGB0 347 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 GOLGA8SH3BPF8 625 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 PSTPIP1O43586 416 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 ERBB2P04626 1255 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 HSPA6P17066 643 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 IBSPP21815 317 aaPredicted RBP11.11□□□□□ -0.63
COPS2-201ENST00000299259 GPD2P43304 727 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
COPS2-201ENST00000299259 LIMS2Q7Z4I7 341 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 KLHL7Q8IXQ5 586 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 UBA3Q8TBC4 463 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 SEZ6LQ9BYH1 1024 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 DPEP3Q9H4B8 488 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 PAK6Q9NQU5 681 aaPredicted RBP11.11□□□□□ -0.63
COPS2-201ENST00000299259 STIM2Q9P246 746 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 HESX1Q9UBX0 185 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
COPS2-201ENST00000299259 SCN5AQ14524 2016 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 CEP350Q5VT06 3117 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 PODXLO00592 558 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 SETSIPP0DME0 302 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 FGFR1P11362 822 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 WARSP23381 471 aaKnown RBP11.1□□□□□ -0.63
COPS2-201ENST00000299259 AFF1P51825 1210 aaKnown RBP11.1□□□□□ -0.63
COPS2-201ENST00000299259 ZNF252P-AS1Q0IIN9 211 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 GRIK3Q13003 919 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 PPP1R26Q5T8A7 1209 aaPredicted RBP11.1□□□□□ -0.63
COPS2-201ENST00000299259 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 AADACL2Q6P093 401 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 XYLT1Q86Y38 959 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 RHOT1Q8IXI2 618 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 MIS12Q9H081 205 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 UBN1Q9NPG3 1134 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 ZNF446Q9NWS9 450 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 USTQ9Y2C2 406 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 PTPN22Q9Y2R2 807 aa11.1□□□□□ -0.63
COPS2-201ENST00000299259 CASTOR2A6NHX0 329 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 HCRTO43612 131 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 SEC31AO94979 1220 aaKnown RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 PYGMP11217 842 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 KRT3P12035 628 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 GNL1P36915 607 aaPredicted RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 GABRB2P47870 512 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 CLCNKBP51801 687 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 MRPS25P82663 173 aaKnown RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 SLC7A5Q01650 507 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 PIGHQ14442 188 aaPredicted RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 DAB2IPQ5VWQ8 1189 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 TTC30AQ86WT1 665 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 NIPA2Q8N8Q9 360 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 HNRNPLLQ8WVV9 542 aaKnown RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 TNIP3Q96KP6 325 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 DEFB118Q96PH6 123 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 DDX47Q9H0S4 455 aaKnown RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 SLITRK6Q9H5Y7 841 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 METTL5Q9NRN9 209 aaKnown RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 MIOSQ9NXC5 875 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 DMGDHQ9UI17 866 aaKnown RBP11.09□□□□□ -0.63
COPS2-201ENST00000299259 PTPRDP23468 1912 aa11.09□□□□□ -0.63
COPS2-201ENST00000299259 SIGLEC16A6NMB1 481 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms