RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 HSPBP1Q9NZL4 362 aa27.13■■□□□ 1.93
U2AF1-201ENST00000291552 SLC38A8A6NNN8 435 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 KIAA0391O15091 583 aaKnown RBP27.12■■□□□ 1.93
U2AF1-201ENST00000291552 EIF3DO15371 548 aaKnown RBP eCLIP27.12■■□□□ 1.93
U2AF1-201ENST00000291552 HUS1O60921 280 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 F13A1P00488 732 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 KRT19P08727 400 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 TMEM191BP0C7N4 346 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 RBP5P82980 135 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 INTS6LQ5JSJ4 861 aaKnown RBP27.12■■□□□ 1.93
U2AF1-201ENST00000291552 FAM26FQ5R3K3 315 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 SDHAF4Q5VUM1 108 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 TXNDC11Q6PKC3 985 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 TMEM86AQ8N2M4 240 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 IQUBQ8NA54 791 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 ZBTB44Q8NCP5 570 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 C7orf25Q9BPX7 421 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 ACBD6Q9BR61 282 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 SLC46A2Q9BY10 475 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 LRRC27Q9C0I9 530 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 DDX43Q9NXZ2 648 aaKnown RBP27.12■■□□□ 1.93
U2AF1-201ENST00000291552 SNX9Q9Y5X1 595 aa27.12■■□□□ 1.93
U2AF1-201ENST00000291552 TGFB1I1O43294 461 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 F11P03951 625 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 CHRNB1P11230 501 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 MLLT6P55198 1093 aaPredicted RBP27.11■■□□□ 1.93
U2AF1-201ENST00000291552 SOWAHAQ2M3V2 549 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 STXBP4Q6ZWJ1 553 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 LIMS2Q7Z4I7 341 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 ADGRF2Q8IZF7 708 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 TOP6BLQ8N6T0 577 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 ZNF507Q8TCN5 953 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 LMAN1LQ9HAT1 526 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 PCDHGA2Q9Y5H1 932 aa27.11■■□□□ 1.93
U2AF1-201ENST00000291552 HELZP42694 1942 aaKnown RBP27.1■■□□□ 1.93
U2AF1-201ENST00000291552 GABRDO14764 452 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 KINO60870 393 aaKnown RBP27.1■■□□□ 1.93
U2AF1-201ENST00000291552 NLRP12P59046 1061 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 GAS6Q14393 721 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 NFE2Q16621 373 aaPredicted RBP27.1■■□□□ 1.93
U2AF1-201ENST00000291552 HSCBQ8IWL3 235 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 TTC8Q8TAM2 541 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 CSGALNACT1Q8TDX6 532 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 KBTBD7Q8WVZ9 684 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 GCNAQ96QF7 691 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 AGPAT3Q9NRZ7 376 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 ZSCAN32Q9NX65 697 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 GTSE1Q9NYZ3 720 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 GTF3C4Q9UKN8 822 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 PCDHA7Q9UN72 937 aa27.1■■□□□ 1.93
U2AF1-201ENST00000291552 ZNF233A6NK53 670 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 DPYSL4O14531 572 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 POLR2DO15514 142 aaKnown RBP27.09■■□□□ 1.93
U2AF1-201ENST00000291552 LILRB5O75023 590 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 PRPF40AO75400 957 aaKnown RBP27.09■■□□□ 1.93
U2AF1-201ENST00000291552 TADA3O75528 432 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 CYP2F1P24903 491 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 MYL7Q01449 175 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 TNK2Q07912 1038 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 DDR2Q16832 855 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 ARHGAP29Q52LW3 1261 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 DCLK2Q8N568 766 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 RIN3Q8TB24 985 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 SPATA18Q8TC71 538 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 SCFD1Q8WVM8 642 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 ANKRD36BP1Q96IX9 119 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 BLZF1Q9H2G9 400 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 ABCB6Q9NP58 842 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 ATG2BQ96BY7 2078 aa27.09■■□□□ 1.93
U2AF1-201ENST00000291552 MYBPHLA2RUH7 354 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 SPECC1L-ADORA2AF8WAN1 911 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 CTHP32929 405 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 AMPD3Q01432 767 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 TAF12Q16514 161 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 RESP18Q5W5W9 173 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 UNC13DQ70J99 1090 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 BPIFB1Q8TDL5 484 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 MSANTD3Q96H12 275 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 GZF1Q9H116 711 aaPredicted RBP27.08■■□□□ 1.93
U2AF1-201ENST00000291552 C8orf33Q9H7E9 229 aaPredicted RBP27.08■■□□□ 1.93
U2AF1-201ENST00000291552 MAGEF1Q9HAY2 307 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 RBM12Q9NTZ6 932 aaKnown RBP27.08■■□□□ 1.93
U2AF1-201ENST00000291552 CCL26Q9Y258 94 aa27.08■■□□□ 1.93
U2AF1-201ENST00000291552 KPNA1P52294 538 aaPredicted RBP27.07■■□□□ 1.92
U2AF1-201ENST00000291552 MAMSTRQ6ZN01 415 aa27.07■■□□□ 1.92
U2AF1-201ENST00000291552 WDR49Q8IV35 697 aa27.07■■□□□ 1.92
U2AF1-201ENST00000291552 NELFCDQ8IXH7 590 aa27.07■■□□□ 1.92
U2AF1-201ENST00000291552 CMTM8Q8IZV2 173 aa27.07■■□□□ 1.92
U2AF1-201ENST00000291552 HPDLQ96IR7 371 aa27.07■■□□□ 1.92
U2AF1-201ENST00000291552 IER2Q9BTL4 223 aa27.07■■□□□ 1.92
U2AF1-201ENST00000291552 UBE4BO95155 1302 aa27.07■■□□□ 1.92
U2AF1-201ENST00000291552 ATP2C2O75185 946 aa27.06■■□□□ 1.92
U2AF1-201ENST00000291552 NOL4O94818 638 aa27.06■■□□□ 1.92
U2AF1-201ENST00000291552 TNNC2P02585 160 aa27.06■■□□□ 1.92
U2AF1-201ENST00000291552 CSH1P0DML2 217 aa27.06■■□□□ 1.92
U2AF1-201ENST00000291552 CSH2P0DML3 217 aa27.06■■□□□ 1.92
U2AF1-201ENST00000291552 LHX1P48742 406 aa27.06■■□□□ 1.92
U2AF1-201ENST00000291552 SURF1Q15526 300 aa27.06■■□□□ 1.92
U2AF1-201ENST00000291552 SNRNP35Q16560 246 aaKnown RBP27.06■■□□□ 1.92
U2AF1-201ENST00000291552 DUOXA2Q1HG44 320 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms