RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 PKMYT1Q99640 499 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 PI4K2AQ9BTU6 479 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 BCO2Q9BYV7 579 aa11.24□□□□□ -0.61
SNF8-201ENST00000290330 R3HCC1Q9Y3T6 440 aaKnown RBP11.24□□□□□ -0.61
SNF8-201ENST00000290330 A0A1B0GVL5 298 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 PRR23AA6NEV1 266 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 ARNTLO00327 626 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 HCRTO43612 131 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 KLRC4O43908 158 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 CST3P01034 146 aaPredicted RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 DLATP10515 647 aaKnown RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 PFKFB1P16118 471 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 HMGA1P17096 107 aaKnown RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 CMA1P23946 247 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 CDC25CP30307 473 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 LHX1P48742 406 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 GPR15P49685 360 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 CYP2J2P51589 502 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 CYP4F8P98187 520 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 FCHO2Q0JRZ9 810 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 FZD5Q13467 585 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 PSMD6Q15008 389 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 TAF12Q16514 161 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 KNOP1Q1ED39 458 aaKnown RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 ARHGAP15Q53QZ3 475 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 HS2ST1Q7LGA3 356 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 TRAPPC11Q7Z392 1133 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 TMEM150AQ86TG1 271 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 C12orf56Q8IXR9 622 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 ADGRF2Q8IZF7 708 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 MAML2Q8IZL2 1156 aaPredicted RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 CCDC127Q96BQ5 260 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 PAGE5Q96GU1 130 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 SPATA32Q96LK8 384 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 LRRC3BQ96PB8 259 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 TASP1Q9H6P5 420 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 GTF3C4Q9UKN8 822 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
SNF8-201ENST00000290330 MRPS17Q9Y2R5 130 aaKnown RBP11.23□□□□□ -0.61
SNF8-201ENST00000290330 MYBPHLA2RUH7 354 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 MAN2B1O00754 1011 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 CHADO15335 359 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 NCAM2O15394 837 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 F11P03951 625 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 SP9P0CG40 484 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 TNNI1P19237 187 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 CYP2F1P24903 491 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 LMO2P25791 158 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 PCSK1P29120 753 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 WEE1P30291 646 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 MAGEA9P43362 315 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 RPS9P46781 194 aaKnown RBP11.22□□□□□ -0.61
SNF8-201ENST00000290330 NLRP12P59046 1061 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 KRT85P78386 507 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 CYP24A1Q07973 514 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 STK4Q13043 487 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 DDR2Q16832 855 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 CCDC142Q17RM4 750 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 CFAP221Q4G0U5 840 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 SDHAF4Q5VUM1 108 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 FAM171BQ6P995 826 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 YAF2Q8IY57 180 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 KIAA0895Q8NCT3 520 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 FAM3CQ92520 227 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 FNBP1Q96RU3 617 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 CGRRF1Q99675 332 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 SLC46A2Q9BY10 475 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 GZF1Q9H116 711 aaPredicted RBP11.22□□□□□ -0.61
SNF8-201ENST00000290330 SPATA6Q9NWH7 488 aaPredicted RBP11.22□□□□□ -0.61
SNF8-201ENST00000290330 OBP2AQ9NY56 170 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 PIAS3Q9Y6X2 628 aa11.22□□□□□ -0.61
SNF8-201ENST00000290330 DPYSL4O14531 572 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 LAMTOR5O43504 91 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 EXOC3O60645 756 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 ATP2C2O75185 946 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 PRAMEF12O95522 483 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 CSH1P0DML2 217 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 CSH2P0DML3 217 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 KCNA4P22459 653 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 WARSP23381 471 aaKnown RBP11.21□□□□□ -0.61
SNF8-201ENST00000290330 MLLT6P55198 1093 aaPredicted RBP11.21□□□□□ -0.61
SNF8-201ENST00000290330 RPL10AP62906 217 aaKnown RBP11.21□□□□□ -0.61
SNF8-201ENST00000290330 PSMD2Q13200 908 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 SPATA2LQ8IUW3 424 aaPredicted RBP11.21□□□□□ -0.61
SNF8-201ENST00000290330 STKLD1Q8NE28 680 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 CSGALNACT1Q8TDX6 532 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 ZNF516Q92618 1163 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNF8-201ENST00000290330 GCNAQ96QF7 691 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 MMS19Q96T76 1030 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 SYT15Q9BQS2 421 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 EXOC1Q9NV70 894 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 USP25Q9UHP3 1055 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 CDH9Q9ULB4 789 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms