RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SLC11A1P49279 550 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 RAD23BP54727 409 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 KRT83P78385 493 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SMARCB1Q12824 385 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC18A3Q16572 532 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 E4F1Q66K89 784 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 ZNF280BQ86YH2 543 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 OLIG1Q8TAK6 271 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 KAT5Q92993 513 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 TSNARE1Q96NA8 513 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 RAD9AQ99638 391 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SNX25Q9H3E2 840 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 CYLDQ9NQC7 956 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 LZTS1Q9Y250 596 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 STXBP5LQ9Y2K9 1186 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SCN1AP35498 2009 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA6L9A6NEM1 432 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 NRP1O14786 923 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 OAZ2O95190 189 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 GALTP07902 379 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 GZMAP12544 262 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SKILP12757 684 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 GNA15P30679 374 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 AFF1P51825 1210 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 GSCP56915 257 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 BCAR1P56945 870 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 TCEAL1Q15170 157 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 TMEM270Q6UE05 265 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 DSTYKQ6XUX3 929 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC4A11Q8NBS3 891 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 C3orf58Q8NDZ4 430 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 FAM84AQ96KN4 292 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 ZNF558Q96NG5 402 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 ACBD6Q9BR61 282 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 HAUS4Q9H6D7 363 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 NXF1Q9UBU9 619 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 FAN1Q9Y2M0 1017 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 CAPN9O14815 690 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SETSIPP0DME0 302 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 PCSK1P29120 753 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 EPHB4P54760 987 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 MRPL58Q14197 206 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SCARA3Q6AZY7 606 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 DDX53Q86TM3 631 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 THEM5Q8N1Q8 247 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 C2orf15Q8WU43 125 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 LRRC45Q96CN5 670 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC42Q96M95 316 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 MRPL45Q9BRJ2 306 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 TSGA10Q9BZW7 698 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 USTQ9Y2C2 406 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 ZKSCAN5Q9Y2L8 839 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 ICE1Q9Y2F5 2266 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 PTPRDP23468 1912 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 GBF1Q92538 1859 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 CYP26A1O43174 497 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 C1RP00736 705 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 CYP1A1P04798 512 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 MYBL1P10243 752 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 KIF11P52732 1056 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 MAPRE1Q15691 268 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 TIGD5Q53EQ6 642 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC157Q569K6 752 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 PPP1R21Q6ZMI0 780 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC39A11Q8N1S5 342 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 MSANTD4Q8NCY6 345 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 UBXN4Q92575 508 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 TRIM11Q96F44 468 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 LCMT1Q9UIC8 334 aa8.94□□□□□ -0.98
PTPDC1-201ENST00000288976 TET1Q8NFU7 2136 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 C5orf67F2Z3F1 127 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 NDUFA10O95299 355 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 GNL1P36915 607 aaPredicted RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 RAP1GAPP47736 663 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 OR1G1P47890 313 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 C1orf228Q6PIY5 440 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 SCARA5Q6ZMJ2 495 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 ZNF571Q7Z3V5 609 aaPredicted RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 MRRFQ96E11 262 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 YME1L1Q96TA2 773 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 UBXN6Q9BZV1 441 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 ELOVL4Q9GZR5 314 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 TXNDC16Q9P2K2 825 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 HSFX1Q9UBD0 423 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 OR6C75A6NL08 312 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 ZSCAN12O43309 604 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 B4GALT3O60512 393 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 ATP2A2P16615 1042 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 ALDH7A1P49419 539 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 GATMP50440 423 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 NDST1P52848 882 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 UBE3AQ05086 875 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA8FQ08AF8 430 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 GOLGA8DPQ0D2H9 430 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 FAM149B1Q96BN6 582 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 IGSF21Q96ID5 467 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 DNAJB4Q9UDY4 337 aa8.93□□□□□ -0.98
PTPDC1-201ENST00000288976 PCDHA11Q9Y5I1 949 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms