RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 AURKCQ9UQB9 309 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ATP11BQ9Y2G3 1177 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 DAGLAQ9Y4D2 1042 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PITPNM2Q9BZ72 1349 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 VWA5AO00534 786 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 DYNC1LI2O43237 492 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PLEKHA8P1O95397 391 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 EPB42P16452 691 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ITGB6P18564 788 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ITIH2P19823 946 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF543Q08ER8 600 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 LRRC74AQ0VAA2 488 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 GNA13Q14344 377 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 C11orf57Q6ZUT1 292 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CNBD2Q96M20 576 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CCSER1Q9C0I3 900 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 GANQ9H2C0 597 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 RANBP17Q9H2T7 1088 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SMYD3Q9H7B4 428 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SAMSN1Q9NSI8 373 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 STK39Q9UEW8 545 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 FAM170AA1A519 330 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ZC3H11AO75152 810 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CELF2O95319 508 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CRTAMO95727 393 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 APRTP07741 180 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 FCGR1AP12314 374 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PTPN3P26045 913 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TALDO1P37837 337 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PLA2G4AP47712 749 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 GEMP55040 296 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SESN2P58004 480 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 GSTA3Q16772 222 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MFSD4BQ5TF39 518 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ADGRF4Q8IZF3 695 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 RBBP8NLQ8NC74 664 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PHC3Q8NDX5 983 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CASP10Q92851 521 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 POP5Q969H6 163 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PPP1R16AQ96I34 528 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 FAM161BQ96MY7 647 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SERPINB12Q96P63 405 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PDGFCQ9NRA1 345 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TBC1D23Q9NUY8 699 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SCN3BQ9NY72 215 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TTC7AQ9ULT0 858 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 DRG1Q9Y295 367 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CHD1O14646 1710 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TTLL13PA6NNM8 815 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TEX28O15482 410 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 KCNN4O15554 427 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 EXTL3O43909 919 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PPIL2Q13356 520 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ANGEL2Q5VTE6 544 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MB21D2Q8IYB1 491 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SYTL1Q8IYJ3 562 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 HS6ST3Q8IZP7 471 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ADGRE3Q9BY15 652 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF518BQ9C0D4 1074 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 LIMA1Q9UHB6 759 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 POLR1DQ9Y2S0 133 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 FAM47DPA6NHR8 397 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PSTPIP1O43586 416 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MSCO60682 206 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 GUCY1B2O75343 617 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 FYNP06241 537 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 RBP1P09455 135 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC159P0C7I6 412 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CDC25AP30304 524 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 STIP1P31948 543 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 FMO5P49326 533 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ATP2C1P98194 919 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 USP10Q14694 798 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PLCL1Q15111 1095 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 LLGL1Q15334 1064 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CLEC16AQ2KHT3 1053 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PRMT9Q6P2P2 845 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 NEK10Q6ZWH5 1172 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MYO1HQ8N1T3 1032 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SRBD1Q8N5C6 995 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TRIM9Q9C026 710 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 DDX28Q9NUL7 540 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 DYRK1BQ9Y463 629 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ZMYND10O75800 440 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ACADMP11310 421 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 YWHAQP27348 245 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CXCR5P32302 372 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CLK1P49759 484 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PDK2Q15119 407 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PCBP1Q15365 356 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TRIP4Q15650 581 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PLEKHH3Q7Z736 793 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ERO1BQ86YB8 467 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 GRAMD1CQ8IYS0 662 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 AGGF1Q8N302 714 aaeCLIP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 UBE2E3Q969T4 207 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 YME1L1Q96TA2 773 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MAP3K14Q99558 947 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 PRKD2Q9BZL6 878 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 RAD21L1Q9H4I0 556 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms