RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.84□□□□□ -0.35
SDE2-201ENST00000272091 UNC93B1Q9H1C4 597 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 TRIM17Q9Y577 477 aa12.84□□□□□ -0.35
SDE2-201ENST00000272091 RAD51CO43502 376 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 GLI1P08151 1106 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 PDCLQ13371 301 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
SDE2-201ENST00000272091 UBL4BQ8N7F7 174 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 C3orf20Q8ND61 904 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 MRPL47Q9HD33 250 aaKnown RBP12.83□□□□□ -0.36
SDE2-201ENST00000272091 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 TAF6P49848 677 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 PRMT2P55345 433 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 RTN4RL1Q86UN2 441 aaPredicted RBP12.83□□□□□ -0.36
SDE2-201ENST00000272091 JOSD2Q8TAC2 188 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 ZNF560Q96MR9 790 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 PAAF1Q9BRP4 392 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 FAM53CQ9NYF3 392 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 MYO1FO00160 1098 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 ZNF623O75123 536 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 SCNN1GP51170 649 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 GOLGA7BQ2TAP0 167 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 ANKS1BQ7Z6G8 1248 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 DDX47Q9H0S4 455 aaKnown RBP12.83□□□□□ -0.36
SDE2-201ENST00000272091 FAM49BQ9NUQ9 324 aa12.83□□□□□ -0.36
SDE2-201ENST00000272091 ARGLU1Q9NWB6 273 aaPredicted RBP12.83□□□□□ -0.36
SDE2-201ENST00000272091 SLC1A1P43005 524 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 C8orf74Q6P047 294 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 DNAJC24Q6P3W2 148 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 DPH6Q7L8W6 267 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
SDE2-201ENST00000272091 PIWIL1Q96J94 861 aaKnown RBP12.82□□□□□ -0.36
SDE2-201ENST00000272091 ADAM2Q99965 735 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 GIT1Q9Y2X7 761 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 A0A0U1RQF3 1178 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 KRIT1O00522 736 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 XPOTO43592 962 aaKnown RBP12.82□□□□□ -0.36
SDE2-201ENST00000272091 MAN1A1P33908 653 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 PNPLA4P41247 253 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 TRADDQ15628 312 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 LONRF2Q1L5Z9 754 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 ZNF598Q86UK7 904 aaKnown RBP12.82□□□□□ -0.36
SDE2-201ENST00000272091 UNC93AQ86WB7 457 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 STARD7Q9NQZ5 370 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 KIAA1257Q9ULG3 409 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 NOD1Q9Y239 953 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 A0A0U1RQG5 324 aaPredicted RBP12.82□□□□□ -0.36
SDE2-201ENST00000272091 CDK7P50613 346 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 CLCNKBP51801 687 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 SV2CQ496J9 727 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 CCNI2Q6ZMN8 369 aaPredicted RBP12.82□□□□□ -0.36
SDE2-201ENST00000272091 ARFGAP1Q8N6T3 406 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 OR6B3Q8NGW1 331 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 MCRS1Q96EZ8 462 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 FUT8Q9BYC5 575 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
SDE2-201ENST00000272091 STIM2Q9P246 746 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 CEP83Q9Y592 693 aa12.82□□□□□ -0.36
SDE2-201ENST00000272091 F8VP50 259 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 ARVCFO00192 962 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 CAND2O75155 1236 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 GPNMBQ14956 572 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 GLE1Q53GS7 698 aaKnown RBP12.81□□□□□ -0.36
SDE2-201ENST00000272091 KIAA0319Q5VV43 1072 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 CD300LGQ6UXG3 332 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 GDF3Q9NR23 364 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 SQORQ9Y6N5 450 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 GOLGA8SH3BPF8 625 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 RFC1P35251 1148 aaPredicted RBP12.81□□□□□ -0.36
SDE2-201ENST00000272091 RWDD2BP57060 319 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 MTFR1Q15390 333 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 CRYBG2Q8N1P7 616 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 C18orf8Q96DM3 657 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 PAK6Q9NQU5 681 aaPredicted RBP12.81□□□□□ -0.36
SDE2-201ENST00000272091 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 PIK3R2O00459 728 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 PDGFRBP09619 1106 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 CCDC130P13994 396 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 WARSP23381 471 aaKnown RBP12.81□□□□□ -0.36
SDE2-201ENST00000272091 ARHGAP17Q68EM7 881 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 TXNRD3NBQ6F5E7 133 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 PMF1Q6P1K2 205 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 MTERF4Q7Z6M4 381 aaKnown RBP12.81□□□□□ -0.36
SDE2-201ENST00000272091 ADGRF2Q8IZF7 708 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 PRELID2Q8N945 189 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 IP6K2Q9UHH9 426 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 TANC1Q9C0D5 1861 aa12.81□□□□□ -0.36
SDE2-201ENST00000272091 A8MXQ7 604 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 SART1O43290 800 aaKnown RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 THP07101 528 aa12.8□□□□□ -0.36
SDE2-201ENST00000272091 TKTP29401 623 aaKnown RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 GNL1P36915 607 aaPredicted RBP12.8□□□□□ -0.36
SDE2-201ENST00000272091 PSMC1P62191 440 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms