RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 TMEM191CA6NGB0 347 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 ARL5CA6NH57 179 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 GOLGA8SH3BPF8 625 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 CCDC188H7C350 402 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 HCRTO43612 131 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 PYGMP11217 842 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 SCNN1GP51170 649 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 TAP1Q03518 808 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 PDCLQ13371 301 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 STILQ15468 1287 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 CLUL1Q15846 466 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 GOLGA7BQ2TAP0 167 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 PPP1R15BQ5SWA1 713 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 PPP1R26Q5T8A7 1209 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 DCUN1D2Q6PH85 259 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 ADAT2Q7Z6V5 191 aaKnown RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 HNRNPLLQ8WVV9 542 aaKnown RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 C18orf8Q96DM3 657 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 ADAM2Q99965 735 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 TRAIPQ9BWF2 469 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 DPEP3Q9H4B8 488 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 FAM49BQ9NUQ9 324 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 STIM2Q9P246 746 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 CACNG4Q9UBN1 327 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 L1RE1Q9UN81 338 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 PHF24Q9UPV7 400 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 SQORQ9Y6N5 450 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 A0A0U1RQF3 1178 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 HUS1O60921 280 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 ZNF623O75123 536 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 ERBB2P04626 1255 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 FGFR1P11362 822 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 MAN1A1P33908 653 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 GNL1P36915 607 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 PSMC1P62191 440 aaKnown RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 ADGRF2Q8IZF7 708 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 DDX47Q9H0S4 455 aaKnown RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 SNX25Q9H3E2 840 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 MIOSQ9NXC5 875 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
SCAF11-201ENST00000266589 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
SCAF11-201ENST00000266589 ARVCFO00192 962 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 ZRANB2O95218 330 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 MYCP01106 439 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 PFKMP08237 780 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 PDGFRBP09619 1106 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 SSR1P43307 286 aaKnown RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 GSCP56915 257 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 OGDHQ02218 1023 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 LIMS2Q7Z4I7 341 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 XYLT1Q86Y38 959 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 TOP6BLQ8N6T0 577 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 RUBCNQ92622 972 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 RSAD1Q9HA92 442 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 ST7Q9NRC1 585 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 WDR35Q9P2L0 1181 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 LCMT1Q9UIC8 334 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 BRCA2P51587 3418 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 GOLGA6L10A0A0M3HER8 536 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 PODXLO00592 558 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 SART1O43290 800 aaKnown RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 RAD51CO43502 376 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 PSTPIP1O43586 416 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 HEXIM1O94992 359 aaKnown RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 KRT3P12035 628 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 LMO2P25791 158 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 GABRB2P47870 512 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 CLCNKBP51801 687 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 TAS2R40P59535 323 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 BEND6Q5SZJ8 279 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 TRAF7Q6Q0C0 670 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 RHOT1Q8IXI2 618 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 PGBD4Q96DM1 585 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 LPIN3Q9BQK8 851 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 BEGAINQ9BUH8 593 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 PLVAPQ9BX97 442 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 PLEKHA4Q9H4M7 779 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
SCAF11-201ENST00000266589 NR2E1Q9Y466 385 aa12.22□□□□□ -0.45
SCAF11-201ENST00000266589 SIGLEC16A6NMB1 481 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 DNM1LO00429 736 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 CYB561D2O14569 222 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 GLI1P08151 1106 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 SKIP12755 728 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 IGFBP6P24592 240 aaPredicted RBP12.21□□□□□ -0.45
SCAF11-201ENST00000266589 ZNF268Q14587 947 aaPredicted RBP12.21□□□□□ -0.45
SCAF11-201ENST00000266589 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 ARHGAP17Q68EM7 881 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 TTC30AQ86WT1 665 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 GSPT2Q8IYD1 628 aaKnown RBP12.21□□□□□ -0.45
SCAF11-201ENST00000266589 JOSD2Q8TAC2 188 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
SCAF11-201ENST00000266589 DNAI2Q9GZS0 605 aa12.21□□□□□ -0.45
SCAF11-201ENST00000266589 HESX1Q9UBX0 185 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms