RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 DPEP3Q9H4B8 488 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 PARVAQ9NVD7 372 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 KIF4AO95239 1232 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 ODC1P11926 461 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 IGFBP6P24592 240 aaPredicted RBP13.78□□□□□ -0.2
VAMP7-201ENST00000262640 LMO2P25791 158 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 GPD2P43304 727 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 PPP1R26Q5T8A7 1209 aaPredicted RBP13.78□□□□□ -0.2
VAMP7-201ENST00000262640 RSPH1Q8WYR4 309 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 HESX1Q9UBX0 185 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 UQCRHLA0A096LP55 91 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 UQCRHP07919 91 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 SETSIPP0DME0 302 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
VAMP7-201ENST00000262640 MAMLD1Q13495 774 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 TIGD5Q53EQ6 642 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 RABGGTAQ92696 567 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 FAM193BQ96PV7 902 aaPredicted RBP13.78□□□□□ -0.2
VAMP7-201ENST00000262640 MIS12Q9H081 205 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 FAM49BQ9NUQ9 324 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 DSEQ9UL01 958 aa13.78□□□□□ -0.2
VAMP7-201ENST00000262640 SRGAP2O75044 1071 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 CAPN15O75808 1086 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 GSCP56915 257 aaPredicted RBP13.77□□□□□ -0.21
VAMP7-201ENST00000262640 CKAP4Q07065 602 aaKnown RBP13.77□□□□□ -0.21
VAMP7-201ENST00000262640 PDCLQ13371 301 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 MESDQ14696 234 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 PTPN20Q4JDL3 420 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 PKDCCQ504Y2 493 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 CNKSR3Q6P9H4 555 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 DEFB128Q7Z7B8 93 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 B3GALNT2Q8NCR0 500 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 UBA3Q8TBC4 463 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 HES6Q96HZ4 224 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 WDR35Q9P2L0 1181 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 LCMT1Q9UIC8 334 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 PACSIN2Q9UNF0 486 aaPredicted RBP13.77□□□□□ -0.21
VAMP7-201ENST00000262640 ALG6Q9Y672 507 aa13.77□□□□□ -0.21
VAMP7-201ENST00000262640 MYH10P35580 1976 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.76□□□□□ -0.21
VAMP7-201ENST00000262640 TMEM110-MUSTN1A8MSY1 372 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 M0QZQ0 153 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 CES2O00748 559 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 CTIFO43310 598 aaKnown RBP13.76□□□□□ -0.21
VAMP7-201ENST00000262640 HCRTO43612 131 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 DDHD2O94830 711 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 CYP11A1P05108 521 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 GABRB2P47870 512 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 TAP1Q03518 808 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 DNAJC24Q6P3W2 148 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
VAMP7-201ENST00000262640 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 TDRD15B5MCY1 1934 aaKnown RBP13.76□□□□□ -0.21
VAMP7-201ENST00000262640 MIF4GDA9UHW6 222 aaKnown RBP13.76□□□□□ -0.21
VAMP7-201ENST00000262640 MYO1FO00160 1098 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 PTPN1P18031 435 aaKnown RBP13.76□□□□□ -0.21
VAMP7-201ENST00000262640 IKBKEQ14164 716 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 TTC30AQ86WT1 665 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 CRIPAKQ8N1N5 446 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 SUSD3Q96L08 255 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 CASD1Q96PB1 797 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 DDX43Q9NXZ2 648 aaKnown RBP13.76□□□□□ -0.21
VAMP7-201ENST00000262640 RNF14Q9UBS8 474 aa13.76□□□□□ -0.21
VAMP7-201ENST00000262640 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 PFKMP08237 780 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 CCDC130P13994 396 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 PCSK1P29120 753 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 BCAT1P54687 386 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
VAMP7-201ENST00000262640 PAN2Q504Q3 1202 aaKnown RBP13.75□□□□□ -0.21
VAMP7-201ENST00000262640 CYP4A22Q5TCH4 519 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 CREG2Q8IUH2 290 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 ANKRD52Q8NB46 1076 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 COG1Q8WTW3 980 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 STK32AQ8WU08 396 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 PBKQ96KB5 322 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 BTBD6Q96KE9 485 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 CAPZA3Q96KX2 299 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 PSMB7Q99436 277 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 MRPL9Q9BYD2 267 aaKnown RBP13.75□□□□□ -0.21
VAMP7-201ENST00000262640 KCNK3O14649 394 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 KIAA0355O15063 1070 aa13.75□□□□□ -0.21
VAMP7-201ENST00000262640 ZNF185O15231 689 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms