RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 LAMTOR4Q0VGL1 99 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 GRIK3Q13003 919 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 RAB33AQ14088 237 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 PLA2G2CQ5R387 149 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 TCEAL6Q6IPX3 200 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 ZNF720Q7Z2F6 126 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 HACE1Q8IYU2 909 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 GSTCDQ8NEC7 633 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 KIAA1524Q8TCG1 905 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 PSPC1Q8WXF1 523 aaKnown RBP14.34□□□□□ -0.11
SGCA-201ENST00000262018 TCEAL3Q969E4 200 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 KIF12Q96FN5 646 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 NXF3Q9H4D5 531 aaKnown RBP14.34□□□□□ -0.11
SGCA-201ENST00000262018 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 TRPV5Q9NQA5 729 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 XPNPEP1Q9NQW7 623 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 DSPP15924 2871 aaKnown RBP14.34□□□□□ -0.11
SGCA-201ENST00000262018 TICRRQ7Z2Z1 1910 aa14.34□□□□□ -0.11
SGCA-201ENST00000262018 A0A1W2PQC6 194 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 C4orf47A7E2U8 309 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 ZNF263O14978 683 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 TSPAN1O60635 241 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.11
SGCA-201ENST00000262018 PTPN2P17706 415 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 MPLP40238 635 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 MTIF2P46199 727 aaKnown RBP14.33□□□□□ -0.11
SGCA-201ENST00000262018 RAP1GAPP47736 663 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 MXD4Q14582 209 aaPredicted RBP14.33□□□□□ -0.11
SGCA-201ENST00000262018 SH3PXD2AQ5TCZ1 1133 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 PDXDC1Q6P996 788 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 VITQ6UXI7 678 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 STXBP4Q6ZWJ1 553 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 CREBRFQ8IUR6 639 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 RNF149Q8NC42 400 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 GAB3Q8WWW8 586 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 TCEAL4Q96EI5 215 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 CCDC51Q96ER9 411 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 EDEM2Q9BV94 578 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 STRA6Q9BX79 667 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 AVENQ9NQS1 362 aaPredicted RBP14.33□□□□□ -0.11
SGCA-201ENST00000262018 VPS45Q9NRW7 570 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 PARP2Q9UGN5 583 aa14.33□□□□□ -0.11
SGCA-201ENST00000262018 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 ASAP2O43150 1006 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 NRDCO43847 1150 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 CALUO43852 315 aaPredicted RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 PPP1R37O75864 691 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 KIF4AO95239 1232 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 GNA14O95837 355 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 PLS3P13797 630 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 NMT1P30419 496 aaKnown RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 AXLP30530 894 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 HOXA6P31267 233 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 VIPR2P41587 438 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 PXNP49023 591 aaPredicted RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 MARSP56192 900 aaKnown RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 UBXN1Q04323 297 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 ALCAMQ13740 583 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 NFIL3Q16649 462 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 MIIPQ5JXC2 388 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 RTL10Q7L3V2 364 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 DRC1Q96MC2 740 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 ASB16Q96NS5 453 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 CORO1BQ9BR76 489 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 LARSQ9P2J5 1176 aaKnown RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 PCDHGA5Q9Y5G8 931 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.32□□□□□ -0.12
SGCA-201ENST00000262018 COL4A2P08572 1712 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 CETN3O15182 167 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 LRG1P02750 347 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 SKILP12757 684 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 ARL2P36404 184 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 SOX9P48436 509 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 KPNA1P52294 538 aaPredicted RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 TUSC3Q13454 348 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 TRIM14Q14142 442 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 MAN2A1Q16706 1144 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 SOWAHCQ53LP3 525 aaPredicted RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 PRSS36Q5K4E3 855 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 DAB2IPQ5VWQ8 1189 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 CCDC112Q8NEF3 446 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 CSGALNACT1Q8TDX6 532 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 DEPDC1BQ8WUY9 529 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 KIFAP3Q92845 792 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 SMARCD2Q92925 531 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 EEF2KMTQ96G04 330 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 POLR3FQ9H1D9 316 aaPredicted RBP14.32□□□□□ -0.12
SGCA-201ENST00000262018 ST6GALNAC4Q9H4F1 302 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 AKAP13Q12802 2813 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 SPAG17Q6Q759 2223 aa14.32□□□□□ -0.12
SGCA-201ENST00000262018 ZMYM2Q9UBW7 1377 aa14.31□□□□□ -0.12
SGCA-201ENST00000262018 WDR27A2RRH5 827 aa14.31□□□□□ -0.12
SGCA-201ENST00000262018 SLC38A8A6NNN8 435 aa14.31□□□□□ -0.12
SGCA-201ENST00000262018 TGFB1I1O43294 461 aa14.31□□□□□ -0.12
SGCA-201ENST00000262018 ELAVL2Q12926 359 aaKnown RBP14.31□□□□□ -0.12
SGCA-201ENST00000262018 ADAM9Q13443 819 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms