RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 THPOP40225 353 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 NDST1P52848 882 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 GSCP56915 257 aaPredicted RBP29.28■■■□□ 2.28
CCM2-201ENST00000258781 DHX34Q14147 1143 aaKnown RBP29.28■■■□□ 2.28
CCM2-201ENST00000258781 ADAT2Q7Z6V5 191 aaKnown RBP29.28■■■□□ 2.28
CCM2-201ENST00000258781 FAM228AQ86W67 206 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 RHOT1Q8IXI2 618 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 IFT81Q8WYA0 676 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 DDX27Q96GQ7 796 aaKnown RBP29.28■■■□□ 2.28
CCM2-201ENST00000258781 APOL6Q9BWW8 343 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 NFU1Q9UMS0 254 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 NOD1Q9Y239 953 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 ATF7P17544 494 aaPredicted RBP29.27■■■□□ 2.28
CCM2-201ENST00000258781 PTK7Q13308 1070 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 ORC1Q13415 861 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 CYP1B1Q16678 543 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 TRIM71Q2Q1W2 868 aaKnown RBP29.27■■■□□ 2.28
CCM2-201ENST00000258781 PTPN20Q4JDL3 420 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 SGO2Q562F6 1265 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 SEC14L1Q92503 715 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 C18orf25Q96B23 403 aaPredicted RBP29.27■■■□□ 2.28
CCM2-201ENST00000258781 NT5C1AQ9BXI3 368 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 OSBPL7Q9BZF2 842 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 PLEKHA4Q9H4M7 779 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 FAM187AA6NFU0 413 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 O00370 1275 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 MICAL2O94851 1124 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 AKAP5P24588 427 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 C9orf57Q5W0N0 161 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 PRELID2Q8N945 189 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 HEXIM2Q96MH2 286 aaKnown RBP29.27■■■□□ 2.28
CCM2-201ENST00000258781 WDR35Q9P2L0 1181 aa29.27■■■□□ 2.28
CCM2-201ENST00000258781 ARVCFO00192 962 aa29.26■■■□□ 2.27
CCM2-201ENST00000258781 FSCN2O14926 492 aa29.26■■■□□ 2.27
CCM2-201ENST00000258781 TTI1O43156 1089 aa29.26■■■□□ 2.27
CCM2-201ENST00000258781 RPL7AP62424 266 aaKnown RBP29.26■■■□□ 2.27
CCM2-201ENST00000258781 STILQ15468 1287 aa29.26■■■□□ 2.27
CCM2-201ENST00000258781 RUNDC3BQ96NL0 473 aa29.26■■■□□ 2.27
CCM2-201ENST00000258781 CYTH4Q9UIA0 394 aa29.26■■■□□ 2.27
CCM2-201ENST00000258781 IPPQ9Y573 584 aa29.26■■■□□ 2.27
CCM2-201ENST00000258781 SMIM28A0A1B0GU29 152 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 PPEF2O14830 753 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 GJB6O95452 261 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 DR1Q01658 176 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 GLRA4Q5JXX5 417 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 DCUN1D2Q6PH85 259 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 KATNAL2Q8IYT4 538 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 MAIP1Q8WWC4 291 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 GDAP1L1Q96MZ0 367 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 MCEEQ96PE7 176 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 RAB17Q9H0T7 212 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 PARP2Q9UGN5 583 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 CYP3A5P20815 502 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 AARSP49588 968 aaKnown RBP eCLIP29.25■■■□□ 2.27
CCM2-201ENST00000258781 NIPA2Q8N8Q9 360 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 C12orf50Q8NA57 414 aaPredicted RBP29.25■■■□□ 2.27
CCM2-201ENST00000258781 SMG8Q8ND04 991 aaKnown RBP29.25■■■□□ 2.27
CCM2-201ENST00000258781 PCYOX1Q9UHG3 505 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 UTP11Q9Y3A2 253 aaKnown RBP29.25■■■□□ 2.27
CCM2-201ENST00000258781 SNX9Q9Y5X1 595 aa29.25■■■□□ 2.27
CCM2-201ENST00000258781 PIRO00625 290 aa29.24■■■□□ 2.27
CCM2-201ENST00000258781 MNX1P50219 401 aaPredicted RBP29.24■■■□□ 2.27
CCM2-201ENST00000258781 SIX1Q15475 284 aaPredicted RBP29.24■■■□□ 2.27
CCM2-201ENST00000258781 CYP4A22Q5TCH4 519 aa29.24■■■□□ 2.27
CCM2-201ENST00000258781 LCLAT1Q6UWP7 414 aa29.24■■■□□ 2.27
CCM2-201ENST00000258781 ZDHHC14Q8IZN3 488 aa29.24■■■□□ 2.27
CCM2-201ENST00000258781 C18orf8Q96DM3 657 aa29.24■■■□□ 2.27
CCM2-201ENST00000258781 ZNF560Q96MR9 790 aa29.24■■■□□ 2.27
CCM2-201ENST00000258781 KIAA0100Q14667 2235 aaKnown RBP29.24■■■□□ 2.27
CCM2-201ENST00000258781 M0QYV0 167 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 OAS2P29728 719 aaKnown RBP29.23■■■□□ 2.27
CCM2-201ENST00000258781 PNPLA4P41247 253 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 CTCFP49711 727 aaPredicted RBP29.23■■■□□ 2.27
CCM2-201ENST00000258781 TAS2R40P59535 323 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 ZNF252P-AS1Q0IIN9 211 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 PIGHQ14442 188 aaPredicted RBP29.23■■■□□ 2.27
CCM2-201ENST00000258781 TWF2Q6IBS0 349 aaKnown RBP29.23■■■□□ 2.27
CCM2-201ENST00000258781 MAGOHBQ96A72 148 aaKnown RBP29.23■■■□□ 2.27
CCM2-201ENST00000258781 CRISPLD2Q9H0B8 497 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 RNF39Q9H2S5 420 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 FAM114A2Q9NRY5 505 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 SIGLEC16A6NMB1 481 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 GABRB2P47870 512 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 CDK7P50613 346 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 ZNF268Q14587 947 aaPredicted RBP29.23■■■□□ 2.27
CCM2-201ENST00000258781 LRRC38Q5VT99 294 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 MREGQ8N565 214 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 ARMC5Q96C12 935 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 CPXM1Q96SM3 734 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 KLK14Q9P0G3 267 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 RASAL2Q9UJF2 1139 aa29.23■■■□□ 2.27
CCM2-201ENST00000258781 TCRBV7S2A1N4TA0A589 114 aa29.22■■■□□ 2.27
CCM2-201ENST00000258781 RARAP10276 462 aa29.22■■■□□ 2.27
CCM2-201ENST00000258781 GPD2P43304 727 aa29.22■■■□□ 2.27
CCM2-201ENST00000258781 TRADDQ15628 312 aa29.22■■■□□ 2.27
CCM2-201ENST00000258781 UNC93AQ86WB7 457 aa29.22■■■□□ 2.27
CCM2-201ENST00000258781 EXD1Q8NHP7 514 aa29.22■■■□□ 2.27
CCM2-201ENST00000258781 MRPL45Q9BRJ2 306 aaKnown RBP29.22■■■□□ 2.27
CCM2-201ENST00000258781 AGO3Q9H9G7 860 aaKnown RBP29.22■■■□□ 2.27
CCM2-201ENST00000258781 MED4Q9NPJ6 270 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms